Gene detail

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Gene detail information of Glyur000097s00008307.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G30170.1	1.00E-126	Peroxidase family protein
NR	XP_004498581.1	0	PREDICTED: peroxidase 45-like [Cicer arietinum]
Swissprot	tr\|Q96522\|PER45_ARATH	3.00E-158	Peroxidase 45 (Precursor)
trEMBL	tr\|A0A072VDU0\|A0A072VDU0_MEDTR	0	Class III peroxidase {ECO:0000313\|EMBL:KEH39756.1}

Sequence

Transcript Sequence

>Glyur000097s00008307.1
ATGACTTCCAAGATCCTCCTCACCTTCCTTGTTAACCTGTTTCTTCTGCAGCTCATAGCTACTTGTTGTCATGCAAAACTTAGTGTGCACTACTACAGAAACACATGCCCGAATGTCGAATCAATCGTCCGCAATGCAGTTGAGATGAAGTTTCAGCAGACATTTGTGACAGCACCTGCTACACTTAGACTCTTCTTCCATGATTGTTTTGTTCGGGGATGTGATGCTTCTGTCATGCTAGCTTCAAGAAACAGCACTTCAGAGAAAGACAATCCTATCAATCTCTCACTAGCTGGTGATGGATTTGACACTGTGATCAAAGCCAAGGCTGCTGTTGACAGTGTACCTGGCTGCCAAAACAAGGTTTCATGTGCTGACATCTTGGCAATGGCAACTCGGGATGTCATAGCATTGACAGGAGGGCCATCTTATGCAGTAGAGTTGGGGAGGATAGATGGGAGAATCTCTACAAAAGCCAGTGTCAGACACCATCTACCTCATCCTGAATTTGACCTAAAAAAGCTAACCCAAATGTTTGCTTTACATGGCCTCACCCTTACAGATCTAGTTGCTCTATCAGGAGCACATACNATTGGGTTCTCTCACTGCAGCCAGTTCTCCAAAAGAATTTACAACTTCAGAAGCAAGAAGAGAATTGATCCGTCACTTAATGATGCATATGTAAAACAGCTCCAGCAAGTGTGTCCAAGAAATGTAGACCCCAGAATTGCCATTGACATGGACCCAACTACACCTAGGACATTTGATAACCAGTACTACAAGAATCTTCAGCAAGGAAAAGGACTCCTTTCTTCTGATCAGTCTTTGTTTACTCATAAAAGTTCAAGAAACCTAGTGAACTTGTTTGCATCCAACAACACAGCCTTTGAAACTTCTTTTGTAAATGCTATAATAAAGCTTGGGAGGATTGGGGTCAAAACNGGAAGCCAGGGTGAAATCAGGCATGATTGCACAATGGTTAACTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00097	146977	148689	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function GO:0004601 peroxidase activity GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000097s00008307.1	PF00141.18	peroxidase	44	292	1.20E-68

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.966
SRR1783600	control	2.067
SRR1783602	moderate drought stress	1.270
SRR1811619	moderate drought stress	1.299

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.555
DRR006520	Root Summer glycyrrhizin high producing strain	3.700
DRR006521	Root Winter glycyrrhizin high producing strain	0.198
DRR006522	Root Winter glycyrrhizin high producing strain	0.218
DRR006523	Root Summer glycyrrhizin low producing strain	4.146
DRR006524	Root Summer glycyrrhizin low producing strain	4.133
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.093
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.235

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	23.026
SRR2868004	Drought Stress(Tissue:root)	21.645
SRR2967015	Control (Tissue:root)	15.104

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.842
SRR9715740	Leave	0.283
SRR9715741	Leave	0.494
SRR9715739	Root	0.045
SRR9715742	Root	0.370
SRR9715743	Root	0.475

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.068
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.042
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	4.718
SRR8400027	Control-Root	3.159