Gene detail information of Glyur000097s00008308.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G24520.10H(+)-ATPase 5
NRKEH39758.10plasma membrane H+-ATPase [Medicago truncatula]
COGYP_005270382.18.00E-117plasma-membrane proton-efflux P-type ATPase [Acetobacterium woodii DSM 1030]
Swissprottr|Q9SJB3|PMA5_ARATH0ATPase 5, plasma membrane-type
trEMBLtr|A0A072VE74|A0A072VE74_MEDTR0Plasma membrane H+-ATPase {ECO:0000313|EMBL:KEH39758.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00097151079155929-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01535PMA1, PMA2 EC:3.6.3.6 Oxidative phosphorylation map00190


Gene Ontology

cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0046872  metal ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000097s00008308.1PF00122.15E1-E2_ATPase251901.50E-32
Glyur000097s00008308.1PF00702.21Hydrolase1714343.70E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.453
SRR1783600control0.507
SRR1783602moderate drought stress0.455
SRR1811619moderate drought stress0.573

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.766
DRR006520Root Summer glycyrrhizin high producing strain2.269
DRR006521Root Winter glycyrrhizin high producing strain0.493
DRR006522Root Winter glycyrrhizin high producing strain0.462
DRR006523Root Summer glycyrrhizin low producing strain1.610
DRR006524Root Summer glycyrrhizin low producing strain1.416
DRR006525Leaf Summer glycyrrhizin high producing strain2.422
DRR006526Leaf Summer glycyrrhizin high producing strain2.559

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.521
SRR2868004Drought Stress(Tissue:root)8.629
SRR2967015Control (Tissue:root)6.802

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.313
SRR9715740Leave2.304
SRR9715741Leave4.251
SRR9715739Root0.223
SRR9715742Root2.526
SRR9715743Root2.182

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.159
SRR8749028MeJA induced 9h0.803
SRR8749029MeJA induced 9h0.061
SRR8749030Uninduced0.455
SRR8749031Uninduced0.428
SRR8749032Uninduced0.315

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.889
SRR8400027Control-Root4.148

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved