Gene detail

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Gene detail information of Glyur000097s00008328.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G24370.1	0	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
NR	XP_007161331.1	0	hypothetical protein PHAVU_001G060600g [Phaseolus vulgaris]
COG	YP_008151634.1	4.00E-24	hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprot	tr\|Q9SW11\|PUB35_ARATH	6.00E-142	Serine/threonine-protein kinase
trEMBL	tr\|V7CVM8\|V7CVM8_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW33325.1}

Sequence

Transcript Sequence

>Glyur000097s00008328.1
ATGTGGTTGCAAAGGAATCAATGGGAGAGGAGGGATGGGGTGAATGGAATAGTGGCAGTGGCAATAGGCGCAGATAAAAGGAGCCAATATGCACTCAAATGGGCCGTTGACCATCTCCTCACCAAAGGCTCAACGGTAGTTCTCATCCATGTCAAGGTTATGTCAACTTCTTATTCTACATCAACCCCAAGGATGAATGGTATTTTTGAGCAGGGTTCATTGTTGTGTGAAAACCCCGATGACCAAACCAAAGGAATTTTCCTCCCATATCGTATCTTTTGTGCACGGAAAGATATACACTGCAAGGTCATAGTACTAGAACATGCAGATGTAGCAAAAGCTATAATTGAATATGCTTCTCAATCAGCAATTGAGCATTTGGTTATAGGCTCTACAAGCAAAAGTGGTTTCCTCAGAAGATTCAAGGTAGCAGATATTCCAGGGACAGTGTCAAAAGGGGCACCAAATTTCTGTACAGTATATGTTGTTTCCAAAGGAAAGATTCAATCCATACGATCTGCTTCTCGTCCTGCTCCTGCATTTTCCCCTTTGCAAAGCCANCTTACTTATGCCAGTAGTACCTGGTCTGATAGGGTTTTGATAGGGAATCAATGGGAGAGGAAGGATGGGGTGAATGGAATAGTGGCAGTGGCAATAGACACAGATAAAGGGAGCCAGAATGCACTCAAATGGGCCATTGACCATCTCCTCACCAAAGGATCAACTGTAGTTCTCATCCATGTCAAGGTTAAGTCAACTTCTTATTCTGCATCAACCCCAAGGGCAGGGATGAATGGTATTTTTGAGCAGGGTTCACTGGTGTGCAGAGACCCTGATGAGCAAACCAAAGAAATTTTCCGCCCATACCGTGTCTTCTGTGCACGGAAAGATATACACTGCAAGGACATTNTACTAGAATATGCAGATGTACCCAAAGCTATAATTGAATATGCTTCTCAATCAGCAATTGAGCATTTGGTTATAGGCTCTTCAAACAAAAGTGGTTTTCTAAGAAGATTCAAGGTAGCAGATATTCCAGGGACAGTGTCAAAAGGGGCACCAGATTTTTGTACAGTATATGTTATTTCTAAAGGAAAGATTCAATCCATGCGATCTGCTTCTCGTCCTGCTCCTGCATTTTCCCCTCTGCAAAGCCAGCTTAGTCATGCTCGTAGTACCAGGTCAGACAACCTAGACCCTCCACGCATGCCACCATCAACAAGTGTGAAAGGATCTGATAGGAGGTCCTTTGAAGGACCCCGTAGATCACATGAGGGAACAGAATCCTTCAGGTCACCATTCACTAGGAGAGGTATGAATGACAGGTCATATGGGGAAATTTCATTGCCAGACACTGACATAACCTTTGTAAGCTCAGGAAGGTCAAGCACAGATCGGTTATTTCCTTCCTTACATAATAACTTAGAGACAGGCTTTTCCAACCCTAGGCTATCATATAGCTCTGATACAGATGGAAACTATAACTATAGCTTTGAGTCAATACATTATGGAAGGAGGTCTATGGACATTGGCACTCCTGATCATTTCTCATCTTTCTCACATGATAGTGAGGGGCTATCATCTTCTACACCACAAACTATGGATGATGTGGAGGCTGAAATGAGGAGACTAAAGTTGGAGCTCAAGCAAACAATGGAAATGTATAGCACGGCTTGTAAAGAAGCACTCACAGCACAACAGAAGGCTGTAGAACTCCAACGCTGGAAATTGGAGGAAGAGAGGAGATTGGAAGAGGCAAGGCTGGCCGAAGAAGCTGCATTAGCGACNGCAGAAAAGGAGAAGGCCAAGTCAAGAGCAGCCATTGAGACTGCTGAAGCACAAAAGAGGGTTGCAGAACTGGAAGCACAGAAGAGAATTAGCGCCGAAATGAAAGCTCTAAAAGAAGCAGAAGAGAAAAGAAAAGCAGTTGATGCTTTGTCAGGCAGAGATATCATGTATAGAAGGTATGGAATTGAGGAGATTGAAGCTGCAACAGATTTCTTTTCCGAGTCCCTCAAGATTGGAGAAGGGGGCTATGGTCCAGTTTATAAATGCCTTCTGGACCATACACTTGTTGCCGTGAAGGTTCTACGTCCTGATGCAGCACAAGGAAGGTCACAGTTCCAACGAGAGGTTGAGGTGTTGAGCTGCATACGGCATCCAAACATGGTTCTCCTTTTAGGGGCCTGCCCAGAGTATGGCTGCCTAGTTTACGAGTACATGGCGAGAGGAAGCTTGGATGACTGCCTGTTTGGCCGAGGAAACAGTCCCCCAATTCCTTGGCAGCTAAGGTTCAAGATAGCAGCTGAAATAGGCACAGGCTTACTCTTCCTCCACCAGACAAAACCTGAGCCTCTGGTACACAGAGACCTGAAACCAGCCAACATCTTGCTTGACCGCAACTATGTGGCGAAGATCAGTGATGTGGGGTTGGCCAGGCTAGTGCCACCCTCCGTGGCAGACACCGTGACACAATACCACATGACATCCACTGCTGGAACCTTCTGCTACATAGACCCTGAGTACCAGCAGACAGGAATGCTTGGGGTGAAATCTGACATATACTCCCTTGGGATCATTTTCTTGCAAATCTTGACAGCAAGACCACCAATGGGTTTGACACACCATGTTGGCAGGTCCATTGAGAAGGGAACATTTGCTGACATGCTGGACCCAAAAGTGCCAGACTGGCCAGTGGAAGAAGCCTTGATCCTTGCAAAGATGGGAATCCAGTGTGCTGAGTTAAGGAGGAAAGATAGACCTGACCTTGGCAAGGAGGTCCTCCCAGAACTACAGAGGCTAAGACAACTTGCTGAGAATACCGATCCCTATTCATCCTTGGGTGGCTATATTAGCCCTTCCAGCCAGAGCCAAGTCTCTCTTCAGCTGATTGCAAAAGCAATAGTCACAGTGTACGAATGTTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00097	275901	288725	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.14.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0006950 response to stress

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000097s00008328.1	PF00582.21	Usp	18	155	1.10E-11
Glyur000097s00008328.1	PF00582.21	Usp	215	340	7.10E-12
Glyur000097s00008328.1	PF00069.20	Pkinase	673	872	4.00E-39

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.050
SRR1783600	control	0.049
SRR1783602	moderate drought stress	0.022
SRR1811619	moderate drought stress	0.023

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.038
DRR006522	Root Winter glycyrrhizin high producing strain	0.037
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.332
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.313

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.120
SRR2868004	Drought Stress(Tissue:root)	0.124
SRR2967015	Control (Tissue:root)	0.090

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.454
SRR9715740	Leave	0.424
SRR9715741	Leave	0.151
SRR9715739	Root	0.000
SRR9715742	Root	0.063
SRR9715743	Root	0.042

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.003
SRR8749028	MeJA induced 9h	0.003
SRR8749029	MeJA induced 9h	0.012
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.030
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.119
SRR8400027	Control-Root	0.082