Gene detail information of Glyur000097s00008331.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31250.1 | 7.00E-111 | Leucine-rich repeat protein kinase family protein |
| NR | XP_003588623.1 | 0 | Receptor-like protein kinase [Medicago truncatula] |
| COG | NP_578384.1 | 8.00E-13 | serine/threonine-protein kinase [Pyrococcus furiosus DSM 3638] |
| Swissprot | tr|C0LGR9|Y4312_ARATH | 0 | Probable LRR receptor-like serine/threonine-protein kinase At4g31250 (Precursor) |
| trEMBL | tr|G7I573|G7I573_MEDTR | 0 | LRR receptor-like kinase {ECO:0000313|EMBL:AES58874.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00097 | 290743 | 293644 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.13.4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000097s00008331.1 | PF08263.7 | LRRNT_2 | 31 | 64 | 0.0002 |
| Glyur000097s00008331.1 | PF13855.1 | LRR_8 | 117 | 176 | 1.10E-09 |
| Glyur000097s00008331.1 | PF00560.28 | LRR_1 | 190 | 208 | 1.1 |
| Glyur000097s00008331.1 | PF00069.20 | Pkinase | 344 | 537 | 2.00E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.005 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.054 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.055 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.055 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.046 |
| SRR2967015 | Control (Tissue:root) | 0.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.033 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.008 |
| SRR8400027 | Control-Root | 0.000 |