Gene detail information of Glyur000097s00008338.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G17550.18.00E-61homology to ABI2
NRXP_006601194.11.01E-127PREDICTED: protein phosphatase 2C 16-like isoform X8 [Glycine max]
Swissprottr|Q9LNP9|P2C07_ARATH1.00E-71Protein phosphatase 2C 7 (Precursor)
trEMBLtr|K7MN95|K7MN95_SOYBN2.00E-129Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G33410.7}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00097314926315722-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14497PP2C EC:3.1.3.16 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0006470  protein dephosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0004722  protein serine/threonine phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000097s00008338.1PF00481.16PP2C792278.70E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.283
SRR1783600control4.949
SRR1783602moderate drought stress5.770
SRR1811619moderate drought stress5.008

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.029
DRR006520Root Summer glycyrrhizin high producing strain3.632
DRR006521Root Winter glycyrrhizin high producing strain1.134
DRR006522Root Winter glycyrrhizin high producing strain1.262
DRR006523Root Summer glycyrrhizin low producing strain4.557
DRR006524Root Summer glycyrrhizin low producing strain3.868
DRR006525Leaf Summer glycyrrhizin high producing strain3.005
DRR006526Leaf Summer glycyrrhizin high producing strain2.959

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.398
SRR2868004Drought Stress(Tissue:root)2.100
SRR2967015Control (Tissue:root)1.730

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.004
SRR9715740Leave7.308
SRR9715741Leave7.580
SRR9715739Root2.212
SRR9715742Root4.849
SRR9715743Root2.960

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.154
SRR8749028MeJA induced 9h0.121
SRR8749029MeJA induced 9h0.463
SRR8749030Uninduced0.339
SRR8749031Uninduced0.333
SRR8749032Uninduced0.412

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.194
SRR8400027Control-Root6.345

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved