Gene detail

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Gene detail information of Glyur000098s00007965.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G57630.1	3.00E-116	CBL-interacting protein kinase 21
NR	AES92374.2	0	CBL-interacting kinase [Medicago truncatula]
COG	YP_001982125.1	8.00E-27	serine/threonine protein kinase PpkA [Cellvibrio japonicus Ueda107]
Swissprot	tr\|Q94CG0\|CIPKL_ARATH	6.00E-142	CBL-interacting serine/threonine-protein kinase 21
trEMBL	tr\|G7JD36\|G7JD36_MEDTR	0	CBL-interacting kinase {ECO:0000313\|EMBL:AES92374.2}

Sequence

Transcript Sequence

>Glyur000098s00007965.1
ATGGGGTCTGAAAAAAACATAGGGAAGTATAGGCTTGGGAGGACAATCGGAGAAGGTACATTCTCTAAGGTTAAGCTGGGTCTCAATGGCAATACTGGTGAGAAGGTTGCAATCAAGATCATTGATAAGCAAATGACTCATAATCCCCTTCTCAATATATTTTCAATGAACTTTATAAAACAGGTTATTGGCACAANATCGAAGATATACATTGTGATGGATTATGTATCAGGAGGCCACCTATTGGACAAGATGTCNTATGCCAAGAAGTTGAATGAATGTGAGGCCAGAAAACTATTCCAGCAACTTATTGATGCAGTTGACTACTGCCATAATAAAGGAGTTTATCATCGAGATCTAAAGCCAGAAAACTTGCTCCTTGACAGGGAAGGAAATCTCAAAGTGTCTGATTTTGGATTAAGTGCACTGAAAAAGCCTAATGATGTCTTGAACACAAAGTGTGGATCCCCNTCCTACGTGGCACCTGAGCTGCTAATGAGCAAAGGGTACGATGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATCCTTTTTGAATTACTTTCTGGTTGTCTACCCTTTGACGACCAGAATTTAATGAGCTTATATCATAAGATATGCAGAGCAGAATATGTTTGTCCACCATGGTTTACTCAAAGTCAAAAGAAACTAATTGCCAAAATACTTGAACCACGTCCTGGAAAGCGGATAACTATACAAGATATTGTTGAAGATGAATGGTTTCAAACAGATTATAAGCCTGCTTGTTCATCTGAATTCGATNCGGTCATTAACTTGGACGATGATATTGCTGCTTTCGATTCAATTGAGGATCACAAAAAGCAGACAACAAGGCTTGGATCCCAACACACAATCATTGAAACTATAGACAAAATAGAAGCTGCTGCAACAGATGTGAGACTGTCAGTAGAGAAAATAAACAACTTTAAGATAAAAATGCACCCGAAACAGATGATGACTAGGTGTTCTAGATCATACTTTGACCTCTCAGCCCAGGTGATAGAAGTTGCTCCAGCTCACTGTGTTATAGAAATATCAAAATCTGCAGGAGATCTAAGAATGTACAACAAATTTTGTGAAAGTTTATCAAGTTTGCTGAAACAAAAATCTGGTGTGCCATCATCACGAAGCCAAGATTCTGTGGATCAATGCGACTCTGGCATAAAAAAGCAAGATGCTGAATGGTAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00098	23625	26207	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000098s00007965.1	PF00069.20	Pkinase	10	248	1.10E-61

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.016
SRR1783600	control	0.069
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.107
DRR006520	Root Summer glycyrrhizin high producing strain	0.186
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.540
DRR006524	Root Summer glycyrrhizin low producing strain	0.714
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.244
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.282

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.187
SRR2868004	Drought Stress(Tissue:root)	0.121
SRR2967015	Control (Tissue:root)	0.168

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	6.108
SRR9715740	Leave	3.119
SRR9715741	Leave	2.512
SRR9715739	Root	0.000
SRR9715742	Root	0.051
SRR9715743	Root	0.077

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.002
SRR8749028	MeJA induced 9h	0.054
SRR8749029	MeJA induced 9h	0.067
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.032
SRR8749032	Uninduced	0.014

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.064
SRR8400027	Control-Root	0.007