Gene detail information of Glyur000098s00007974.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57620.1 | 2.00E-69 | myb domain protein 36 |
| NR | XP_006593553.1 | 1.91E-168 | PREDICTED: transcription factor RAX1 [Glycine max] |
| Swissprot | tr|Q9M2Y9|RAX3_ARATH | 9.00E-79 | Transcription factor RAX3 |
| trEMBL | tr|I1LVT6|I1LVT6_SOYBN | 7.00E-169 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G01200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00098 | 49105 | 50783 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000098s00007974.1 | PF00249.26 | Myb_DNA-binding | 14 | 62 | 5.60E-13 |
| Glyur000098s00007974.1 | PF00249.26 | Myb_DNA-binding | 69 | 111 | 7.30E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.121 |
| SRR1783600 | control | 0.093 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.026 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.512 |
| SRR2967015 | Control (Tissue:root) | 24.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.009 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.041 |
| SRR9715743 | Root | 0.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.363 |
| SRR8749028 | MeJA induced 9h | 53.849 |
| SRR8749029 | MeJA induced 9h | 15.610 |
| SRR8749030 | Uninduced | 29.807 |
| SRR8749031 | Uninduced | 15.047 |
| SRR8749032 | Uninduced | 11.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.682 |
| SRR8400027 | Control-Root | 1.356 |