Gene detail information of Glyur000098s00007981.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G57590.10adenosylmethionine-8-amino-7-oxononanoate transaminases
NRAES92354.20adenosylmethionine-8-amino-7-oxononanoate transaminase [Medicago truncatula]
COGYP_004579119.14.00E-15adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Lacinutrix sp. 5H-3-7-4]
Swissprottr|B0F481|BIODA_ARATH07,8-diamino-pelargonic acid aminotransferase (Precursor)
trEMBLtr|G7JD16|G7JD16_MEDTR0Adenosylmethionine-8-amino-7-oxononanoate transaminase {ECO:0000313|EMBL:AES92354.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000988725295477+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K19562BIO3-BIO1 EC:6.3.3.3 2.6.1.62 Biotin metabolism map00780


Gene Ontology

biological_process

GO:0009102  biotin biosynthetic process


molecular_function

GO:0000287  magnesium ion binding

GO:0003824  catalytic activity

GO:0004141  dethiobiotin synthase activity

GO:0005524  ATP binding

GO:0008483  transaminase activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000098s00007981.1PF13500.1AAA_26342919.10E-45
Glyur000098s00007981.1PF00202.16Aminotran_33965081.20E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.745
SRR1783600control5.816
SRR1783602moderate drought stress4.419
SRR1811619moderate drought stress4.410

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.030
DRR006520Root Summer glycyrrhizin high producing strain5.549
DRR006521Root Winter glycyrrhizin high producing strain1.865
DRR006522Root Winter glycyrrhizin high producing strain1.735
DRR006523Root Summer glycyrrhizin low producing strain5.733
DRR006524Root Summer glycyrrhizin low producing strain5.251
DRR006525Leaf Summer glycyrrhizin high producing strain3.104
DRR006526Leaf Summer glycyrrhizin high producing strain2.721

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.123
SRR2868004Drought Stress(Tissue:root)6.397
SRR2967015Control (Tissue:root)6.304

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.319
SRR9715740Leave6.753
SRR9715741Leave6.182
SRR9715739Root5.246
SRR9715742Root6.408
SRR9715743Root5.813

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.025
SRR8749028MeJA induced 9h5.867
SRR8749029MeJA induced 9h5.302
SRR8749030Uninduced4.600
SRR8749031Uninduced1.393
SRR8749032Uninduced3.003

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.945
SRR8400027Control-Root7.316

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved