Gene detail information of Glyur000098s00008022.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57390.1 | 2.00E-109 | AINTEGUMENTA-like 5 |
| NR | XP_003541472.1 | 0 | PREDICTED: AP2-like ethylene-responsive transcription factor AIL5-like [Glycine max] |
| Swissprot | tr|Q6PQQ3|AIL5_ARATH | 1.00E-138 | AP2-like ethylene-responsive transcription factor AIL5 |
| trEMBL | tr|I1LVQ8|I1LVQ8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G00950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00098 | 344004 | 347786 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | AP2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000098s00008022.1 | PF00847.15 | AP2 | 165 | 221 | 3.50E-09 |
| Glyur000098s00008022.1 | PF00847.15 | AP2 | 264 | 315 | 1.80E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.492 |
| SRR1783600 | control | 3.471 |
| SRR1783602 | moderate drought stress | 6.008 |
| SRR1811619 | moderate drought stress | 5.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.838 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.835 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.163 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.739 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.495 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.423 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.519 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 16.946 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.149 |
| SRR2967015 | Control (Tissue:root) | 20.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.973 |
| SRR9715740 | Leave | 0.058 |
| SRR9715741 | Leave | 0.399 |
| SRR9715739 | Root | 0.802 |
| SRR9715742 | Root | 4.043 |
| SRR9715743 | Root | 2.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 117.503 |
| SRR8749028 | MeJA induced 9h | 198.437 |
| SRR8749029 | MeJA induced 9h | 144.738 |
| SRR8749030 | Uninduced | 42.092 |
| SRR8749031 | Uninduced | 56.810 |
| SRR8749032 | Uninduced | 62.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.895 |
| SRR8400027 | Control-Root | 10.800 |