Gene detail information of Glyur000099s00014943.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G46680.16.00E-57homeobox 7
NRKHN15901.18.36E-131Homeobox-leucine zipper protein ATHB-12 [Glycine soja]
Swissprottr|P46897|ATHB7_ARATH4.00E-72Homeobox-leucine zipper protein ATHB-7
trEMBLtr|I1MKF3|I1MKF3_SOYBN1.00E-130Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G02390.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00099146882148814+


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000099s00014943.1PF00046.24Homeobox481003.80E-16
Glyur000099s00014943.1PF02183.13HALZ1021458.00E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.377
SRR1783600control0.383
SRR1783602moderate drought stress1.000
SRR1811619moderate drought stress1.018

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain127.739
DRR006520Root Summer glycyrrhizin high producing strain125.616
DRR006521Root Winter glycyrrhizin high producing strain180.767
DRR006522Root Winter glycyrrhizin high producing strain176.213
DRR006523Root Summer glycyrrhizin low producing strain98.745
DRR006524Root Summer glycyrrhizin low producing strain98.843
DRR006525Leaf Summer glycyrrhizin high producing strain12.999
DRR006526Leaf Summer glycyrrhizin high producing strain13.046

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.372
SRR2868004Drought Stress(Tissue:root)35.513
SRR2967015Control (Tissue:root)22.232

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.531
SRR9715740Leave5.276
SRR9715741Leave7.138
SRR9715739Root0.490
SRR9715742Root7.737
SRR9715743Root5.994

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.304
SRR8749028MeJA induced 9h196.284
SRR8749029MeJA induced 9h29.280
SRR8749030Uninduced80.221
SRR8749031Uninduced41.397
SRR8749032Uninduced27.590

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.889
SRR8400027Control-Root4.282

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved