Gene detail information of Glyur000099s00014961.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G40010.14.00E-89SNF1-related protein kinase 2.7
NRXP_004502407.15.16E-153PREDICTED: serine/threonine-protein kinase SAPK2-like isoform X1 [Cicer arietinum]
COGYP_004862245.14.00E-15protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
Swissprottr|Q75LR7|SAPK1_ORYSJ6.00E-125Serine/threonine-protein kinase SAPK1
trEMBLtr|A0A072V0R0|A0A072V0R0_MEDTR2.00E-149Serine/Threonine-kinase SAPK1-like protein {ECO:0000313|EMBL:KEH35291.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00099260501264382-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14498SNRK2 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000099s00014961.1PF00069.20Pkinase51234.80E-26
Glyur000099s00014961.1PF00069.20Pkinase1241762.90E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.694
SRR1783600control0.703
SRR1783602moderate drought stress1.151
SRR1811619moderate drought stress1.266

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.233
DRR006520Root Summer glycyrrhizin high producing strain3.407
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain1.989
DRR006524Root Summer glycyrrhizin low producing strain1.985
DRR006525Leaf Summer glycyrrhizin high producing strain17.543
DRR006526Leaf Summer glycyrrhizin high producing strain17.399

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.883
SRR2868004Drought Stress(Tissue:root)69.276
SRR2967015Control (Tissue:root)66.182

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.072
SRR9715740Leave28.041
SRR9715741Leave37.696
SRR9715739Root0.619
SRR9715742Root0.536
SRR9715743Root0.485

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.145
SRR8749028MeJA induced 9h5.774
SRR8749029MeJA induced 9h2.089
SRR8749030Uninduced6.545
SRR8749031Uninduced13.241
SRR8749032Uninduced6.242

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.770
SRR8400027Control-Root6.369

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved