Gene detail information of Glyur000099s00014965.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G22430.15.00E-58homeobox protein 6
NRXP_003552015.12.38E-131PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Glycine max]
Swissprottr|P46668|ATHB6_ARATH2.00E-73Homeobox-leucine zipper protein ATHB-6
trEMBLtr|I1MYP2|I1MYP2_SOYBN9.00E-132Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G01830.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00099320570323544-


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000099s00014965.1PF00046.24Homeobox561093.70E-16
Glyur000099s00014965.1PF02183.13HALZ1111548.80E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control178.245
SRR1783600control177.814
SRR1783602moderate drought stress192.547
SRR1811619moderate drought stress191.547

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain170.910
DRR006520Root Summer glycyrrhizin high producing strain169.033
DRR006521Root Winter glycyrrhizin high producing strain58.229
DRR006522Root Winter glycyrrhizin high producing strain56.672
DRR006523Root Summer glycyrrhizin low producing strain166.329
DRR006524Root Summer glycyrrhizin low producing strain166.174
DRR006525Leaf Summer glycyrrhizin high producing strain25.062
DRR006526Leaf Summer glycyrrhizin high producing strain24.871

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)188.245
SRR2868004Drought Stress(Tissue:root)179.731
SRR2967015Control (Tissue:root)216.219

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.748
SRR9715740Leave32.082
SRR9715741Leave32.575
SRR9715739Root27.898
SRR9715742Root61.565
SRR9715743Root59.549

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h40.073
SRR8749028MeJA induced 9h38.316
SRR8749029MeJA induced 9h25.661
SRR8749030Uninduced20.814
SRR8749031Uninduced1.712
SRR8749032Uninduced4.062

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root207.191
SRR8400027Control-Root209.857

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved