Gene detail information of Glyur000100s00008360.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G64060.10respiratory burst oxidase protein F
NRAEP25513.10putative respiratory burst oxidase-like protein C [Vicia faba]
COGYP_007146260.13.00E-76putative ferric reductase [Cylindrospermum stagnale PCC 7417]
Swissprottr|O48538|RBOHF_ARATH0Respiratory burst oxidase homolog protein F
trEMBLtr|G4XDS2|G4XDS2_VICFA0Putative respiratory burst oxidase-like protein C {ECO:0000313|EMBL:AEP25513.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001005071760994-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13447RBOH EC:1.6.3.- 1.11.1.- MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


cellular_component

GO:0016020  membrane


molecular_function

GO:0004601  peroxidase activity

GO:0005509  calcium ion binding

GO:0016491  oxidoreductase activity

GO:0050664  oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000100s00008360.1PF08414.5NADPH_Ox1662658.30E-43
Glyur000100s00008360.1PF13405.1EF-hand_62672910.0014
Glyur000100s00008360.1PF01794.14Ferric_reduct4476115.10E-11
Glyur000100s00008360.1PF08022.7FAD_binding_86537674.10E-31
Glyur000100s00008360.1PF08030.7NAD_binding_67749792.80E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.584
SRR1783600control17.823
SRR1783602moderate drought stress11.958
SRR1811619moderate drought stress12.122

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.494
DRR006520Root Summer glycyrrhizin high producing strain3.535
DRR006521Root Winter glycyrrhizin high producing strain1.214
DRR006522Root Winter glycyrrhizin high producing strain1.144
DRR006523Root Summer glycyrrhizin low producing strain3.649
DRR006524Root Summer glycyrrhizin low producing strain3.713
DRR006525Leaf Summer glycyrrhizin high producing strain3.125
DRR006526Leaf Summer glycyrrhizin high producing strain3.019

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.187
SRR2868004Drought Stress(Tissue:root)51.357
SRR2967015Control (Tissue:root)35.777

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.367
SRR9715740Leave21.249
SRR9715741Leave20.975
SRR9715739Root7.404
SRR9715742Root26.827
SRR9715743Root24.197

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h82.642
SRR8749028MeJA induced 9h112.241
SRR8749029MeJA induced 9h101.506
SRR8749030Uninduced27.531
SRR8749031Uninduced37.061
SRR8749032Uninduced31.783

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.156
SRR8400027Control-Root22.699

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved