Gene detail information of Glyur000100s00008369.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G11280.11.00E-1801-aminocyclopropane-1-carboxylic acid (acc) synthase 6
NRXP_004503673.10PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like [Cicer arietinum]
COGYP_004582080.16.00E-701-aminocyclopropane-1-carboxylate deaminase [Frankia symbiont of Datisca glomerata]
Swissprottr|P31531|1A1C_SOYBN01-aminocyclopropane-1-carboxylate synthase
trEMBLtr|A0A072TUM5|A0A072TUM5_MEDTR01-aminocyclopropane-1-carboxylate synthase {ECO:0000313|EMBL:KEH21137.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00100131640135383+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K20772ACS1_2_6 EC:4.4.1.14 Cysteine and methionine metabolism map00270
MAPK signaling pathway - plantmap04016


Gene Ontology

biological_process

GO:0009058  biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000100s00008369.1PF00155.16Aminotran_1_2504328.60E-104


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.159
SRR1783600control0.159
SRR1783602moderate drought stress0.149
SRR1811619moderate drought stress0.146

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain36.186
DRR006520Root Summer glycyrrhizin high producing strain35.180
DRR006521Root Winter glycyrrhizin high producing strain0.145
DRR006522Root Winter glycyrrhizin high producing strain0.142
DRR006523Root Summer glycyrrhizin low producing strain62.050
DRR006524Root Summer glycyrrhizin low producing strain61.902
DRR006525Leaf Summer glycyrrhizin high producing strain19.362
DRR006526Leaf Summer glycyrrhizin high producing strain19.380

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.248
SRR2868004Drought Stress(Tissue:root)24.346
SRR2967015Control (Tissue:root)20.851

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave75.560
SRR9715740Leave28.445
SRR9715741Leave72.977
SRR9715739Root33.557
SRR9715742Root91.364
SRR9715743Root76.547

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.484
SRR8749028MeJA induced 9h7.028
SRR8749029MeJA induced 9h4.401
SRR8749030Uninduced75.070
SRR8749031Uninduced37.494
SRR8749032Uninduced13.448

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.424
SRR8400027Control-Root22.877

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved