Gene detail information of Glyur000100s00008372.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G63940.20monodehydroascorbate reductase 6
NRKEH21129.10monodehydroascorbate reductase [Medicago truncatula]
COGYP_003327621.12.00E-58FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Xylanimonas cellulosilytica DSM 15894]
Swissprottr|P92947|MDARP_ARATH0Monodehydroascorbate reductase, chloroplastic (Precursor)
trEMBLtr|A0A072TUC0|A0A072TUC0_MEDTR0Monodehydroascorbate reductase {ECO:0000313|EMBL:KEH21129.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00100147396152042-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08232E1.6.5.4 EC:1.6.5.4 Ascorbate and aldarate metabolism map00053


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0050660  flavin adenine dinucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000100s00008372.1PF07992.9Pyr_redox_2562323.50E-19
Glyur000100s00008372.1PF00070.22Pyr_redox2102919.10E-16
Glyur000100s00008372.1PF07992.9Pyr_redox_23163491.80E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control67.907
SRR1783600control68.264
SRR1783602moderate drought stress49.563
SRR1811619moderate drought stress49.028

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain55.952
DRR006520Root Summer glycyrrhizin high producing strain55.230
DRR006521Root Winter glycyrrhizin high producing strain65.353
DRR006522Root Winter glycyrrhizin high producing strain63.102
DRR006523Root Summer glycyrrhizin low producing strain27.686
DRR006524Root Summer glycyrrhizin low producing strain27.740
DRR006525Leaf Summer glycyrrhizin high producing strain10.399
DRR006526Leaf Summer glycyrrhizin high producing strain10.163

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)76.564
SRR2868004Drought Stress(Tissue:root)54.865
SRR2967015Control (Tissue:root)59.878

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.244
SRR9715740Leave17.742
SRR9715741Leave15.050
SRR9715739Root78.383
SRR9715742Root99.466
SRR9715743Root95.471

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h48.636
SRR8749028MeJA induced 9h61.699
SRR8749029MeJA induced 9h32.821
SRR8749030Uninduced15.775
SRR8749031Uninduced15.035
SRR8749032Uninduced12.244

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root61.953
SRR8400027Control-Root60.800

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved