Gene detail information of Glyur000100s00008375.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63910.1 | 5.00E-70 | myb domain protein 103 |
| NR | KHN16792.1 | 1.09E-166 | Transcription factor MYB86 [Glycine soja] |
| Swissprot | tr|Q8LPH6|MYB86_ARATH | 2.00E-60 | Transcription factor MYB86 |
| trEMBL | tr|I1KPE8|I1KPE8_SOYBN | 4.00E-167 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G02080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00100 | 171458 | 173615 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000100s00008375.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 9.30E-14 |
| Glyur000100s00008375.1 | PF00249.26 | Myb_DNA-binding | 67 | 111 | 2.30E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.509 |
| SRR1783600 | control | 1.524 |
| SRR1783602 | moderate drought stress | 1.585 |
| SRR1811619 | moderate drought stress | 1.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.778 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.680 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.255 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.305 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.022 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.774 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.935 |
| SRR2967015 | Control (Tissue:root) | 3.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.437 |
| SRR9715740 | Leave | 0.752 |
| SRR9715741 | Leave | 0.998 |
| SRR9715739 | Root | 0.607 |
| SRR9715742 | Root | 2.175 |
| SRR9715743 | Root | 0.931 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.537 |
| SRR8400027 | Control-Root | 13.651 |