Gene detail information of Glyur000100s00008383.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41410.1 | 3.00E-80 | POX (plant homeobox) family protein |
| NR | XP_003532909.1 | 0 | PREDICTED: homeobox protein BEL1 homolog isoform X1 [Glycine max] |
| Swissprot | tr|Q38897|BEL1_ARATH | 6.00E-110 | Homeobox protein BEL1 homolog |
| trEMBL | tr|I1KPE2|I1KPE2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G02020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00100 | 226054 | 229717 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000100s00008383.1 | PF07526.6 | POX | 231 | 366 | 1.60E-47 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.151 |
| SRR1783600 | control | 11.411 |
| SRR1783602 | moderate drought stress | 13.749 |
| SRR1811619 | moderate drought stress | 13.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.721 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.726 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.471 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.354 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.855 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.930 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 122.228 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 121.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 24.154 |
| SRR2868004 | Drought Stress(Tissue:root) | 36.784 |
| SRR2967015 | Control (Tissue:root) | 37.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 100.391 |
| SRR9715740 | Leave | 166.753 |
| SRR9715741 | Leave | 111.638 |
| SRR9715739 | Root | 3.764 |
| SRR9715742 | Root | 11.697 |
| SRR9715743 | Root | 9.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.018 |
| SRR8749028 | MeJA induced 9h | 0.752 |
| SRR8749029 | MeJA induced 9h | 0.334 |
| SRR8749030 | Uninduced | 0.587 |
| SRR8749031 | Uninduced | 0.338 |
| SRR8749032 | Uninduced | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 22.807 |
| SRR8400027 | Control-Root | 15.597 |