Gene detail information of Glyur000101s00010287.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G24520.10H(+)-ATPase 5
NRXP_007137116.10hypothetical protein PHAVU_009G100900g [Phaseolus vulgaris]
COGYP_005270382.10plasma-membrane proton-efflux P-type ATPase [Acetobacterium woodii DSM 1030]
Swissprottr|Q9SJB3|PMA5_ARATH0ATPase 5, plasma membrane-type
trEMBLtr|V7AUY2|V7AUY2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW09110.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001011135335+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01535PMA1, PMA2 EC:3.6.3.6 Oxidative phosphorylation map00190


Gene Ontology

cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0046872  metal ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000101s00010287.1PF00122.15E1-E2_ATPase342553.90E-58
Glyur000101s00010287.1PF00702.21Hydrolase2595063.70E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.851
SRR1783600control26.807
SRR1783602moderate drought stress35.857
SRR1811619moderate drought stress35.769

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain65.700
DRR006520Root Summer glycyrrhizin high producing strain65.921
DRR006521Root Winter glycyrrhizin high producing strain9.547
DRR006522Root Winter glycyrrhizin high producing strain9.235
DRR006523Root Summer glycyrrhizin low producing strain91.067
DRR006524Root Summer glycyrrhizin low producing strain91.245
DRR006525Leaf Summer glycyrrhizin high producing strain165.043
DRR006526Leaf Summer glycyrrhizin high producing strain164.469

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)89.933
SRR2868004Drought Stress(Tissue:root)99.632
SRR2967015Control (Tissue:root)96.025

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave235.418
SRR9715740Leave217.982
SRR9715741Leave251.946
SRR9715739Root11.689
SRR9715742Root112.298
SRR9715743Root96.588

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.580
SRR8749028MeJA induced 9h21.367
SRR8749029MeJA induced 9h14.238
SRR8749030Uninduced7.123
SRR8749031Uninduced7.217
SRR8749032Uninduced5.329

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root60.272
SRR8400027Control-Root57.236

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved