Gene detail information of Glyur000101s00010298.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31550.12.00E-94WRKY DNA-binding protein 11
NRABS18446.18.71E-164WRKY50 [Glycine max]
Swissprottr|Q9SV15|WRK11_ARATH3.00E-131Probable WRKY transcription factor 11
trEMBLtr|A7LHI7|A7LHI7_SOYBN3.00E-164WRKY50 {ECO:0000313|EMBL:ABS18446.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001016652468628-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000101s00010298.1PF10533.4Plant_zn_clust1712121.00E-16
Glyur000101s00010298.1PF03106.10WRKY2162739.90E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.162
SRR1783600control12.482
SRR1783602moderate drought stress11.568
SRR1811619moderate drought stress11.393

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain54.837
DRR006520Root Summer glycyrrhizin high producing strain53.697
DRR006521Root Winter glycyrrhizin high producing strain29.613
DRR006522Root Winter glycyrrhizin high producing strain28.686
DRR006523Root Summer glycyrrhizin low producing strain129.203
DRR006524Root Summer glycyrrhizin low producing strain128.780
DRR006525Leaf Summer glycyrrhizin high producing strain59.557
DRR006526Leaf Summer glycyrrhizin high producing strain58.776

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)73.286
SRR2868004Drought Stress(Tissue:root)74.856
SRR2967015Control (Tissue:root)117.457

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave140.288
SRR9715740Leave126.376
SRR9715741Leave141.845
SRR9715739Root136.865
SRR9715742Root116.934
SRR9715743Root109.877

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h362.908
SRR8749028MeJA induced 9h219.337
SRR8749029MeJA induced 9h311.253
SRR8749030Uninduced453.915
SRR8749031Uninduced171.169
SRR8749032Uninduced267.400

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.777
SRR8400027Control-Root51.368

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved