Gene detail

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Gene detail information of Glyur000101s00010311.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G20190.1	5.00E-136	Leucine-rich repeat protein kinase family protein
NR	AET04312.2	0	LRR receptor-like kinase [Medicago truncatula]
COG	NP_578384.1	1.00E-13	serine/threonine-protein kinase [Pyrococcus furiosus DSM 3638]
Swissprot	tr\|C0LGR9\|Y4312_ARATH	2.00E-177	Probable LRR receptor-like serine/threonine-protein kinase At4g31250 (Precursor)
trEMBL	tr\|I1JUP0\|I1JUP0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G08170.1}

Sequence

Transcript Sequence

>Glyur000101s00010311.1
ATGGCCGGCTTAACCAGCTCATGCTTTGCAGGAACAACCTTGTCAATGTCACCCCACAAAACATTACAACCACTCTTAGTCACAATTTCTTATGCACACTCCCTATCGTTGCTCAAACACTCCTCATTTTCTCATCCTTCAGAACCAACCCATTTCAGTTTTCATCATCTTCCAATAATCATGCATCGTGAAAGAGAATACTTTTATCTTTTATTGCTCTTCACGTTGGCCACTTGTTTCTTGCCATCCCTGGCTGCTGACACAGAAGCTCNAGTTCTGATGAACTTCAAGAGCTTCTTGTCCAATGCAGGTGCTTTAAACAACTGGGTGAACGATTCTGATTCGAATATCAGTGTGTGCAGCTGGACTGGTTTAATATGTGTCAATCAAACACTTCATGGTTTGAGACTAGAGAATATGGGACTANGTGGCACCATCAACGTGGACATTTTGCTTGAATTGCCCACTTTGAAGAGTTTCAGTGTCATTAACAATAGCTTTGAGGGTCCAATGCCTGAGTTCAAGAAGCTTGTGGGATTAAGGGCATTGTTTCTTAGCAAGAACAAGTTCTCTGGTGAAATTGGGGGTGATGCTTTTGAAGGGTTGAGAAGGCTGAAGAGAGTGTTCTTGGCAGAAAATGGGNTCACAGGTCACATTCCCACATCCCTTGCTCAATTGCCTAGACTTTTGGATGTTGACTTACGTGGAAATGGTTTTGGTGGCAACATACCTGAATTTCAACAGAGAGATTTCAGGGTGTTTAATTTATCTNACAACCAATTGGAGGGTCCAGTACNAGAAAGCTTAAGCAACCAGGACCCAAGTTCATTTGCAGGAAACCGTGGTCTATGTGGAAAACTTCTAAGCCTCCCCTGCANCAGTAGCAGCAACCCACCCTTATCTCTTCCACATCAAGAAAATGAACACAAGAAACACCGCATGCTTGTTACTATTATTGTGGTTGTGGTTGTGGTTATCTTGGCTTCAATACTAGCACTCGTGTTCATCCGTCACAGTCGAAGGCAAGCTGCAAAACCACAACCCCTGAGGGCCGAGAAGAGTAACACTCCTACTACTACTGGTGCAGTTTCCAGTGAGGCCAAATCCATTGATCATNTGGCAGTGGCAGCAGTTGTAGGTGAATCATCCAAGAAGAATGAGGATGGAGATTTGAGCTTCGTTAGGAACGAAAGGGCGGGTTTTGATTTGGAAGGGTTGCTCAGGGCCTCAGCTGAGGTTCTGGGTAGTGGCAGTTTTGGATCCACCTACAAGGCCATGGTATTGAATGGACCAGTTGTGGTGGTGAAGAGGTTCAAGCACATGAATAGTGTTGGGAAGAAGGACTTCTTTGAGCACATGAGAAGGCTCGGAAGGTTGACACATCCCAACCTGCTCCCTCTTGTTGCATTCTACTATGGAAAAGAAGAGAAGCTTTTGGTACATGACTTTGTTGAAAATGGCAGCTTGGCCAGTCATCTTCATGGTAGGGGTGGTTATGAGTTGGATTGGCCAACTCGTTTGAAGATCATAAAAGGNGTGGCGAGGGGTTTAGCTTACCTATACAGGGAGTTTCCCGATGAGAAGCTACCGCATGGGCATCTCAAGTCGTCCAATGTTGTGTTGGACCGTTCATTGGAGCCTCGTTTGACGGAGTACGGGCTGGTGGCGGTGATGGAGAAGAAGCACGCTCAGCAGTTCATGNCGGGCTTCAAGTCCCCTGAGGTGGGCAAGTATGAAGATGGGGCCAGTGAGAAGAGTGACGTGTGGTGTTTGGGGATACTGATACTGGAGGTGCTGACGGGGAAGTTCCCTGCGAATTATCTGAGACATGGGAAGGGGGCGAGTGAGGATTTGGTGGCGTGGGTGGAGTCGATAGTGAGGGAAGGGTGGAGCGGGGAGGTGTTGGATAAAAGCATTTCTTCTGGGAGTGGGAACGAGGAGGGTGAGATGCTGAAGCTGTTGAGGGTTGGGATGGGTTGCTGTGAGTGGGGTGTGGAGAGTAGGTGGGGTTGGAGGGAGGCAGTGGCCAAGATCGAGGAGTTGAAGGGTGAACAGGGTTCATTTGTATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00101	149302	152323	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.13.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000101s00010311.1	PF08263.7	LRRNT_2	87	127	9.60E-06
Glyur000101s00010311.1	PF00069.20	Pkinase	412	606	1.60E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.949
SRR1783600	control	0.927
SRR1783602	moderate drought stress	0.881
SRR1811619	moderate drought stress	0.896

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.418
DRR006520	Root Summer glycyrrhizin high producing strain	0.435
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	1.458
DRR006524	Root Summer glycyrrhizin low producing strain	1.414
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.224
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.173

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.579
SRR2868004	Drought Stress(Tissue:root)	0.569
SRR2967015	Control (Tissue:root)	0.709

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.053
SRR9715740	Leave	0.256
SRR9715741	Leave	0.158
SRR9715739	Root	0.160
SRR9715742	Root	0.310
SRR9715743	Root	0.311

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.121
SRR8749028	MeJA induced 9h	0.034
SRR8749029	MeJA induced 9h	0.074
SRR8749030	Uninduced	0.001
SRR8749031	Uninduced	0.053
SRR8749032	Uninduced	0.001

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.588
SRR8400027	Control-Root	1.855