Gene detail information of Glyur000101s00010327.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G24430.2 | 4.00E-11 | NAC domain containing protein 38 |
| NR | XP_006578207.1 | 1.95E-51 | PREDICTED: protein CUP-SHAPED COTYLEDON 2-like isoform X3 [Glycine max] |
| Swissprot | tr|O04017|NAC98_ARATH | 3.00E-10 | Protein CUP-SHAPED COTYLEDON 2 |
| trEMBL | tr|I1JUQ5|I1JUQ5_SOYBN | 2.00E-52 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G08320.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00101 | 234881 | 237814 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000101s00010327.1 | PF02365.10 | NAM | 31 | 60 | 1.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.781 |
| SRR1783600 | control | 7.149 |
| SRR1783602 | moderate drought stress | 7.648 |
| SRR1811619 | moderate drought stress | 7.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.547 |
| SRR2868004 | Drought Stress(Tissue:root) | 22.215 |
| SRR2967015 | Control (Tissue:root) | 25.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.006 |
| SRR9715740 | Leave | 0.153 |
| SRR9715741 | Leave | 0.391 |
| SRR9715739 | Root | 4.863 |
| SRR9715742 | Root | 9.883 |
| SRR9715743 | Root | 7.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.029 |
| SRR8749028 | MeJA induced 9h | 0.081 |
| SRR8749029 | MeJA induced 9h | 0.075 |
| SRR8749030 | Uninduced | 0.263 |
| SRR8749031 | Uninduced | 0.092 |
| SRR8749032 | Uninduced | 0.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 33.205 |
| SRR8400027 | Control-Root | 28.362 |