Gene detail information of Glyur000101s00010331.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G32660.11.00E-170Protein kinase superfamily protein
NRXP_004501199.10PREDICTED: serine/threonine-protein kinase AFC3-like [Cicer arietinum]
COGYP_004959349.18.00E-15serine/threonine protein kinase [Streptomyces bingchenggensis BCW-1]
Swissprottr|P51568|AFC3_ARATH0Serine/threonine-protein kinase AFC3
trEMBLtr|I1K978|I1K978_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G08480.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00101252255255797-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000101s00010331.2PF00069.20Pkinase741263.80E-06
Glyur000101s00010331.2PF00069.20Pkinase1393475.30E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.108
SRR1783600control20.162
SRR1783602moderate drought stress30.057
SRR1811619moderate drought stress29.970

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.112
DRR006520Root Summer glycyrrhizin high producing strain22.432
DRR006521Root Winter glycyrrhizin high producing strain37.280
DRR006522Root Winter glycyrrhizin high producing strain36.984
DRR006523Root Summer glycyrrhizin low producing strain23.744
DRR006524Root Summer glycyrrhizin low producing strain22.596
DRR006525Leaf Summer glycyrrhizin high producing strain14.669
DRR006526Leaf Summer glycyrrhizin high producing strain14.669

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.421
SRR2868004Drought Stress(Tissue:root)28.541
SRR2967015Control (Tissue:root)28.492

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.312
SRR9715740Leave23.417
SRR9715741Leave22.005
SRR9715739Root9.709
SRR9715742Root10.792
SRR9715743Root8.969

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h33.980
SRR8749028MeJA induced 9h23.521
SRR8749029MeJA induced 9h26.869
SRR8749030Uninduced30.145
SRR8749031Uninduced23.928
SRR8749032Uninduced28.169

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.269
SRR8400027Control-Root30.082

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved