Gene detail information of Glyur000102s00010934.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G19160.1 | 1.00E-158 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| NR | XP_003543570.1 | 0 | PREDICTED: uncharacterized protein LOC100817202 [Glycine max] |
| trEMBL | tr|I1LVM9|I1LVM9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G00610.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00102 | 36992 | 43174 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000102s00010934.1 | PF02485.16 | Branch | 107 | 336 | 3.10E-84 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.815 |
| SRR1783600 | control | 5.872 |
| SRR1783602 | moderate drought stress | 6.600 |
| SRR1811619 | moderate drought stress | 6.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.814 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.884 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.244 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.006 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.753 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.869 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.223 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 24.019 |
| SRR2868004 | Drought Stress(Tissue:root) | 26.933 |
| SRR2967015 | Control (Tissue:root) | 22.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 14.484 |
| SRR9715740 | Leave | 13.872 |
| SRR9715741 | Leave | 17.355 |
| SRR9715739 | Root | 5.754 |
| SRR9715742 | Root | 11.372 |
| SRR9715743 | Root | 8.853 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.513 |
| SRR8749028 | MeJA induced 9h | 10.876 |
| SRR8749029 | MeJA induced 9h | 5.609 |
| SRR8749030 | Uninduced | 14.373 |
| SRR8749031 | Uninduced | 14.500 |
| SRR8749032 | Uninduced | 9.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 22.911 |
| SRR8400027 | Control-Root | 20.866 |