Gene detail information of Glyur000102s00010950.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57180.1 | 3.00E-50 | chloroplast import apparatus 2 |
| NR | XP_004507897.1 | 0 | PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Cicer arietinum] |
| Swissprot | tr|Q9LU68|CIA2_ARATH | 8.00E-77 | Protein CHLOROPLAST IMPORT APPARATUS 2 (Precursor) |
| trEMBL | tr|G7JUA6|G7JUA6_MEDTR | 1.00E-158 | Import apparatus protein {ECO:0000313|EMBL:AES92251.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00102 | 174400 | 177538 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Orphans |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000102s00010950.1 | PF06203.9 | CCT | 354 | 392 | 1.80E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.841 |
| SRR1783600 | control | 0.816 |
| SRR1783602 | moderate drought stress | 0.778 |
| SRR1811619 | moderate drought stress | 0.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.537 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.555 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.221 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.201 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.065 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.013 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 97.807 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 97.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.944 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.790 |
| SRR2967015 | Control (Tissue:root) | 0.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 44.525 |
| SRR9715740 | Leave | 89.102 |
| SRR9715741 | Leave | 26.388 |
| SRR9715739 | Root | 2.337 |
| SRR9715742 | Root | 1.772 |
| SRR9715743 | Root | 1.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.727 |
| SRR8400027 | Control-Root | 2.905 |