Gene detail information of Glyur000102s00010953.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57170.1 | 3.00E-52 | Tautomerase/MIF superfamily protein |
| NR | AFK37854.1 | 9.36E-74 | unknown [Lotus japonicus] |
| COG | YP_005069505.1 | 2.00E-20 | macrophage migration inhibitory factor family protein [Arthrospira platensis NIES-39] |
| trEMBL | tr|I3SC62|I3SC62_LOTJA | 3.00E-74 | Uncharacterized protein {ECO:0000313|EMBL:AFK37854.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00102 | 200975 | 202828 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K07253 | MIF | EC:5.3.2.1 | Tyrosine metabolism | map00350 |
| Phenylalanine metabolism | map00360 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000102s00010953.1 | PF01187.13 | MIF | 2 | 115 | 4.80E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.015 |
| SRR1783600 | control | 3.907 |
| SRR1783602 | moderate drought stress | 4.193 |
| SRR1811619 | moderate drought stress | 3.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.395 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.699 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.590 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.467 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.252 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.335 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 89.560 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 86.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.386 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.584 |
| SRR2967015 | Control (Tissue:root) | 6.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 49.135 |
| SRR9715740 | Leave | 61.105 |
| SRR9715741 | Leave | 29.389 |
| SRR9715739 | Root | 4.293 |
| SRR9715742 | Root | 3.237 |
| SRR9715743 | Root | 2.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.652 |
| SRR8749028 | MeJA induced 9h | 3.440 |
| SRR8749029 | MeJA induced 9h | 5.898 |
| SRR8749030 | Uninduced | 0.414 |
| SRR8749031 | Uninduced | 0.638 |
| SRR8749032 | Uninduced | 1.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.745 |
| SRR8400027 | Control-Root | 10.079 |