Gene detail information of Glyur000102s00010955.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G51590.10alpha-mannosidase 1
NRXP_004507901.10PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Cicer arietinum]
Swissprottr|Q9C512|MNS1_ARATH0Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1
trEMBLtr|G7JU96|G7JU96_MEDTR0alpha-1,2-Mannosidase {ECO:0000256|RuleBase:RU361193}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00102207311214390+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH47


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01230MAN1 EC:3.2.1.113 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513
Protein processing in endoplasmic reticulummap04141


Gene Ontology

cellular_component

GO:0016020  membrane


molecular_function

GO:0004571  mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

GO:0005509  calcium ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000102s00010955.1PF01532.15Glyco_hydro_471041611.70E-20
Glyur000102s00010955.1PF01532.15Glyco_hydro_471625137.80E-117


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.955
SRR1783600control5.202
SRR1783602moderate drought stress4.714
SRR1811619moderate drought stress4.496

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.801
DRR006520Root Summer glycyrrhizin high producing strain6.974
DRR006521Root Winter glycyrrhizin high producing strain3.138
DRR006522Root Winter glycyrrhizin high producing strain2.914
DRR006523Root Summer glycyrrhizin low producing strain4.713
DRR006524Root Summer glycyrrhizin low producing strain4.433
DRR006525Leaf Summer glycyrrhizin high producing strain4.886
DRR006526Leaf Summer glycyrrhizin high producing strain4.869

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.745
SRR2868004Drought Stress(Tissue:root)7.120
SRR2967015Control (Tissue:root)8.300

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.592
SRR9715740Leave5.202
SRR9715741Leave5.991
SRR9715739Root1.699
SRR9715742Root3.351
SRR9715743Root3.175

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.796
SRR8749028MeJA induced 9h5.378
SRR8749029MeJA induced 9h3.907
SRR8749030Uninduced4.191
SRR8749031Uninduced2.519
SRR8749032Uninduced1.818

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.226
SRR8400027Control-Root11.615

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved