Gene detail information of Glyur000102s00010975.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G17220.21.00E-120Protein kinase superfamily protein
NRXP_003543730.10PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like isoform X1 [Glycine max]
COGYP_008151634.14.00E-26hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|P27450|CX32_ARATH1.00E-126Probable serine/threonine-protein kinase Cx32, chloroplastic (Precursor)
trEMBLtr|I1LVK6|I1LVK6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G00370.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00102337469341000-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000102s00010975.1PF00069.20Pkinase1294036.30E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.988
SRR1783600control5.113
SRR1783602moderate drought stress3.916
SRR1811619moderate drought stress4.004

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.957
DRR006520Root Summer glycyrrhizin high producing strain29.097
DRR006521Root Winter glycyrrhizin high producing strain0.603
DRR006522Root Winter glycyrrhizin high producing strain0.828
DRR006523Root Summer glycyrrhizin low producing strain29.962
DRR006524Root Summer glycyrrhizin low producing strain29.566
DRR006525Leaf Summer glycyrrhizin high producing strain5.555
DRR006526Leaf Summer glycyrrhizin high producing strain5.596

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.460
SRR2868004Drought Stress(Tissue:root)26.521
SRR2967015Control (Tissue:root)17.698

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave35.594
SRR9715740Leave25.755
SRR9715741Leave45.117
SRR9715739Root13.709
SRR9715742Root36.351
SRR9715743Root30.334

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h97.462
SRR8749028MeJA induced 9h233.953
SRR8749029MeJA induced 9h235.081
SRR8749030Uninduced88.742
SRR8749031Uninduced88.675
SRR8749032Uninduced82.465

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.014
SRR8400027Control-Root25.522

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved