Gene detail information of Glyur000103s00007431.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35550.1 | 5.00E-62 | WUSCHEL related homeobox 13 |
| NR | XP_004497297.1 | 6.54E-146 | PREDICTED: WUSCHEL-related homeobox 8-like [Cicer arietinum] |
| Swissprot | tr|O81788|WOX13_ARATH | 2.00E-79 | WUSCHEL-related homeobox 13 |
| trEMBL | tr|A0A072VS22|A0A072VS22_MEDTR | 4.00E-144 | Wuschel-related homeobox protein {ECO:0000313|EMBL:KEH44471.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00103 | 108525 | 111150 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000103s00007431.1 | PF00046.24 | Homeobox | 91 | 151 | 5.00E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.291 |
| SRR1783600 | control | 31.308 |
| SRR1783602 | moderate drought stress | 26.778 |
| SRR1811619 | moderate drought stress | 26.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 42.121 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 41.300 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.064 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.823 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.933 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.921 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.524 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.627 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.686 |
| SRR2868004 | Drought Stress(Tissue:root) | 11.057 |
| SRR2967015 | Control (Tissue:root) | 11.425 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.019 |
| SRR9715740 | Leave | 2.478 |
| SRR9715741 | Leave | 1.145 |
| SRR9715739 | Root | 2.525 |
| SRR9715742 | Root | 8.933 |
| SRR9715743 | Root | 9.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.273 |
| SRR8749028 | MeJA induced 9h | 1.191 |
| SRR8749029 | MeJA induced 9h | 1.814 |
| SRR8749030 | Uninduced | 0.551 |
| SRR8749031 | Uninduced | 0.524 |
| SRR8749032 | Uninduced | 0.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 38.637 |
| SRR8400027 | Control-Root | 48.168 |