Gene detail information of Glyur000103s00007471.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G23300.10pyrimidine d
NRXP_003536739.10PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial-like isoform X1 [Glycine max]
COGYP_423253.14.00E-132dihydroorotate dehydrogenase 2 [Magnetospirillum magneticum AMB-1]
Swissprottr|P32746|PYRD_ARATH0Dihydroorotate dehydrogenase (quinone), mitochondrial (Precursor)
trEMBLtr|I1LF90|I1LF90_SOYBN0Dihydroorotate dehydrogenase (quinone), mitochondrial {ECO:0000256|RuleBase:RU361255}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00103333365338278-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00254DHODH, pyrD EC:1.3.5.2 Pyrimidine metabolism map00240


Gene Ontology

biological_process

GO:0006207  'de novo' pyrimidine nucleobase biosynthetic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0005737  cytoplasm

GO:0016020  membrane


molecular_function

GO:0003824  catalytic activity

GO:0004152  dihydroorotate dehydrogenase activity

GO:0016627  oxidoreductase activity, acting on the CH-CH group of donors

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000103s00007471.1PF01180.16DHO_dh1204388.90E-99


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.132
SRR1783600control8.193
SRR1783602moderate drought stress9.173
SRR1811619moderate drought stress8.939

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.408
DRR006520Root Summer glycyrrhizin high producing strain12.546
DRR006521Root Winter glycyrrhizin high producing strain6.454
DRR006522Root Winter glycyrrhizin high producing strain6.623
DRR006523Root Summer glycyrrhizin low producing strain11.681
DRR006524Root Summer glycyrrhizin low producing strain11.644
DRR006525Leaf Summer glycyrrhizin high producing strain6.785
DRR006526Leaf Summer glycyrrhizin high producing strain6.814

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.866
SRR2868004Drought Stress(Tissue:root)18.781
SRR2967015Control (Tissue:root)17.051

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.384
SRR9715740Leave17.477
SRR9715741Leave18.465
SRR9715739Root8.155
SRR9715742Root15.389
SRR9715743Root15.563

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.618
SRR8749028MeJA induced 9h11.242
SRR8749029MeJA induced 9h8.001
SRR8749030Uninduced3.635
SRR8749031Uninduced2.517
SRR8749032Uninduced2.592

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.790
SRR8400027Control-Root16.058

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved