Gene detail information of Glyur000103s00007473.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G29690.10anthranilate synthase 2
NRXP_004497238.10PREDICTED: anthranilate synthase component I-2, chloroplastic-like [Cicer arietinum]
COGYP_005444340.18.00E-143anthranilate synthase component I [Phycisphaera mikurensis NBRC 102666]
Swissprottr|P32069|TRPX_ARATH0Anthranilate synthase alpha subunit 2, chloroplastic (Precursor)
trEMBLtr|I1NF54|I1NF54_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G23680.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00103338452343233+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01657trpE EC:4.1.3.27 Biosynthesis of amino acids map01230
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Quorum sensingmap02024
Biofilm formation - Pseudomonas aeruginosamap02025


Gene Ontology

biological_process

GO:0000162  tryptophan biosynthetic process

GO:0009058  biosynthetic process


molecular_function

GO:0004049  anthranilate synthase activity

GO:0016833  oxo-acid-lyase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000103s00007473.1PF04715.8Anth_synt_I_N652166.10E-34
Glyur000103s00007473.1PF00425.13Chorismate_bind2775481.20E-83


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control72.716
SRR1783600control73.016
SRR1783602moderate drought stress106.004
SRR1811619moderate drought stress105.469

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain95.142
DRR006520Root Summer glycyrrhizin high producing strain94.237
DRR006521Root Winter glycyrrhizin high producing strain25.061
DRR006522Root Winter glycyrrhizin high producing strain24.330
DRR006523Root Summer glycyrrhizin low producing strain75.155
DRR006524Root Summer glycyrrhizin low producing strain74.609
DRR006525Leaf Summer glycyrrhizin high producing strain16.760
DRR006526Leaf Summer glycyrrhizin high producing strain16.574

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)61.265
SRR2868004Drought Stress(Tissue:root)54.593
SRR2967015Control (Tissue:root)62.426

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.099
SRR9715740Leave17.506
SRR9715741Leave33.540
SRR9715739Root33.921
SRR9715742Root77.246
SRR9715743Root70.724

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h70.300
SRR8749028MeJA induced 9h41.402
SRR8749029MeJA induced 9h41.773
SRR8749030Uninduced5.889
SRR8749031Uninduced2.573
SRR8749032Uninduced8.830

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root93.035
SRR8400027Control-Root98.355

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved