Gene detail information of Glyur000104s00005982.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08280.16.00E-117Glycosyltransferase family 29 (sialyltransferase) family protein
NRXP_004506165.10PREDICTED: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like [Cicer arietinum]
trEMBLtr|Q4JEZ1|Q4JEZ1_MEDTR0Sialyltransferase-like protein {ECO:0000313|EMBL:CAJ15149.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001048187383165+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT29


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006486  protein glycosylation


molecular_function

GO:0008373  sialyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000104s00005982.1PF00777.13Glyco_transf_291834097.30E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.780
SRR1783600control5.785
SRR1783602moderate drought stress4.931
SRR1811619moderate drought stress4.800

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.894
DRR006520Root Summer glycyrrhizin high producing strain7.327
DRR006521Root Winter glycyrrhizin high producing strain1.181
DRR006522Root Winter glycyrrhizin high producing strain1.076
DRR006523Root Summer glycyrrhizin low producing strain16.698
DRR006524Root Summer glycyrrhizin low producing strain17.191
DRR006525Leaf Summer glycyrrhizin high producing strain2.939
DRR006526Leaf Summer glycyrrhizin high producing strain2.997

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.185
SRR2868004Drought Stress(Tissue:root)14.614
SRR2967015Control (Tissue:root)15.003

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.700
SRR9715740Leave8.636
SRR9715741Leave9.006
SRR9715739Root32.804
SRR9715742Root18.067
SRR9715743Root20.279

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.460
SRR8749028MeJA induced 9h8.618
SRR8749029MeJA induced 9h8.270
SRR8749030Uninduced1.838
SRR8749031Uninduced0.965
SRR8749032Uninduced1.399

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.829
SRR8400027Control-Root11.562

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved