Gene detail information of Glyur000104s00005990.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08320.37.00E-106bZIP transcription factor family protein
NRXP_004506172.10PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like isoform X3 [Cicer arietinum]
Swissprottr|O24160|TGA21_TOBAC1.00E-96TGACG-sequence-specific DNA-binding protein TGA-2.1
trEMBLtr|G7JIE0|G7JIE0_MEDTR0BZIP family transcription factor {ECO:0000313|EMBL:AES88309.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00104129008136278-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000104s00005990.1PF00170.16bZIP_12142433.30E-08
Glyur000104s00005990.1PF14144.1DOG12803525.80E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.023
SRR1783600control9.288
SRR1783602moderate drought stress11.156
SRR1811619moderate drought stress11.075

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.080
DRR006520Root Summer glycyrrhizin high producing strain0.079
DRR006521Root Winter glycyrrhizin high producing strain0.037
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.157
DRR006524Root Summer glycyrrhizin low producing strain0.124
DRR006525Leaf Summer glycyrrhizin high producing strain0.721
DRR006526Leaf Summer glycyrrhizin high producing strain0.771

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)167.643
SRR2868004Drought Stress(Tissue:root)221.026
SRR2967015Control (Tissue:root)235.095

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.907
SRR9715740Leave4.284
SRR9715741Leave5.773
SRR9715739Root5.425
SRR9715742Root7.481
SRR9715743Root7.061

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.617
SRR8749028MeJA induced 9h86.098
SRR8749029MeJA induced 9h63.894
SRR8749030Uninduced153.305
SRR8749031Uninduced182.204
SRR8749032Uninduced136.685

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root67.026
SRR8400027Control-Root44.575

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved