Gene detail information of Glyur000104s00006015.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22380.1 | 2.00E-49 | NAC domain containing protein 90 |
| NR | KEH29835.1 | 2.06E-103 | NAC transcription factor-like protein [Medicago truncatula] |
| Swissprot | tr|Q9FMR3|NAC90_ARATH | 1.00E-63 | NAC domain-containing protein 90 |
| trEMBL | tr|A0A072UVE9|A0A072UVE9_MEDTR | 8.00E-104 | NAC transcription factor-like protein {ECO:0000313|EMBL:KEH29835.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00104 | 245618 | 246881 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000104s00006015.1 | PF02365.10 | NAM | 4 | 124 | 2.00E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.118 |
| SRR1783600 | control | 0.116 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.120 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.849 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.143 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.087 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.353 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.485 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.385 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.282 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.507 |
| SRR2967015 | Control (Tissue:root) | 4.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 60.183 |
| SRR9715740 | Leave | 41.616 |
| SRR9715741 | Leave | 91.384 |
| SRR9715739 | Root | 0.897 |
| SRR9715742 | Root | 2.078 |
| SRR9715743 | Root | 1.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.810 |
| SRR8749028 | MeJA induced 9h | 10.475 |
| SRR8749029 | MeJA induced 9h | 8.004 |
| SRR8749030 | Uninduced | 28.573 |
| SRR8749031 | Uninduced | 11.828 |
| SRR8749032 | Uninduced | 3.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.297 |
| SRR8400027 | Control-Root | 1.819 |