Gene detail information of Glyur000105s00014169.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52010.1 | 3.00E-118 | C2H2-like zinc finger protein |
| NR | XP_004498877.1 | 0 | PREDICTED: uncharacterized protein LOC101501064 [Cicer arietinum] |
| trEMBL | tr|W9R4W9|W9R4W9_9ROSA | 1.00E-172 | Uncharacterized protein {ECO:0000313|EMBL:EXB56494.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00105 | 20448 | 21581 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2H2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.819 |
| SRR1783600 | control | 2.960 |
| SRR1783602 | moderate drought stress | 4.238 |
| SRR1811619 | moderate drought stress | 4.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.641 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.858 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.382 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.909 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.448 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.149 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 41.784 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 41.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.719 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.099 |
| SRR2967015 | Control (Tissue:root) | 7.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 34.163 |
| SRR9715740 | Leave | 45.708 |
| SRR9715741 | Leave | 25.612 |
| SRR9715739 | Root | 0.827 |
| SRR9715742 | Root | 3.520 |
| SRR9715743 | Root | 3.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.085 |
| SRR8749028 | MeJA induced 9h | 11.980 |
| SRR8749029 | MeJA induced 9h | 7.646 |
| SRR8749030 | Uninduced | 4.128 |
| SRR8749031 | Uninduced | 3.042 |
| SRR8749032 | Uninduced | 4.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.430 |
| SRR8400027 | Control-Root | 7.702 |