Gene detail information of Glyur000105s00014176.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G12000.10Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
NRKHN16327.10U-box domain-containing protein 52 [Glycine soja]
COGYP_008151634.17.00E-27hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|Q9SW11|PUB35_ARATH1.00E-129Serine/threonine-protein kinase
trEMBLtr|K7M641|K7M641_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G12791.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001055066164986-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.14.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0006950  response to stress


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000105s00014176.1PF00582.21Usp141169.00E-07
Glyur000105s00014176.1PF07714.12Pkinase_Tyr4146713.60E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.992
SRR1783600control3.920
SRR1783602moderate drought stress7.566
SRR1811619moderate drought stress7.606

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.089
DRR006520Root Summer glycyrrhizin high producing strain6.227
DRR006521Root Winter glycyrrhizin high producing strain4.713
DRR006522Root Winter glycyrrhizin high producing strain4.640
DRR006523Root Summer glycyrrhizin low producing strain7.016
DRR006524Root Summer glycyrrhizin low producing strain6.834
DRR006525Leaf Summer glycyrrhizin high producing strain1.723
DRR006526Leaf Summer glycyrrhizin high producing strain1.764

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.110
SRR2868004Drought Stress(Tissue:root)30.851
SRR2967015Control (Tissue:root)30.691

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.101
SRR9715740Leave1.072
SRR9715741Leave1.475
SRR9715739Root3.681
SRR9715742Root7.558
SRR9715743Root6.155

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.364
SRR8749028MeJA induced 9h7.215
SRR8749029MeJA induced 9h4.863
SRR8749030Uninduced4.853
SRR8749031Uninduced5.682
SRR8749032Uninduced5.364

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.502
SRR8400027Control-Root11.042

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved