Gene detail information of Glyur000105s00014176.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G12000.1 | 0 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
| NR | KHN16327.1 | 0 | U-box domain-containing protein 52 [Glycine soja] |
| COG | YP_008151634.1 | 7.00E-27 | hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2] |
| Swissprot | tr|Q9SW11|PUB35_ARATH | 1.00E-129 | Serine/threonine-protein kinase |
| trEMBL | tr|K7M641|K7M641_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G12791.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00105 | 50661 | 64986 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.2.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000105s00014176.2 | PF07714.12 | Pkinase_Tyr | 256 | 530 | 1.40E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.992 |
| SRR1783600 | control | 3.920 |
| SRR1783602 | moderate drought stress | 7.566 |
| SRR1811619 | moderate drought stress | 7.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.089 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.227 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.713 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.640 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.016 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.834 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.723 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 26.110 |
| SRR2868004 | Drought Stress(Tissue:root) | 30.851 |
| SRR2967015 | Control (Tissue:root) | 30.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.101 |
| SRR9715740 | Leave | 1.072 |
| SRR9715741 | Leave | 1.475 |
| SRR9715739 | Root | 3.681 |
| SRR9715742 | Root | 7.558 |
| SRR9715743 | Root | 6.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.364 |
| SRR8749028 | MeJA induced 9h | 7.215 |
| SRR8749029 | MeJA induced 9h | 4.863 |
| SRR8749030 | Uninduced | 4.853 |
| SRR8749031 | Uninduced | 5.682 |
| SRR8749032 | Uninduced | 5.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.502 |
| SRR8400027 | Control-Root | 11.042 |