Gene detail information of Glyur000105s00014180.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G72770.32.00E-136homology to ABI1
NRXP_004498842.10PREDICTED: protein phosphatase 2C 16-like isoform X1 [Cicer arietinum]
COGYP_001089095.17.00E-07phosphatase [Clostridium difficile 630]
Swissprottr|Q9CAJ0|P2C16_ARATH3.00E-167Protein phosphatase 2C 16 (Precursor)
trEMBLtr|G7I8Z3|G7I8Z3_MEDTR0Protein phosphatase 2C family protein {ECO:0000313|EMBL:AES59163.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001058323888411-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14497PP2C EC:3.1.3.16 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0006470  protein dephosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0004722  protein serine/threonine phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000105s00014180.3PF00481.16PP2C2775391.90E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.092
SRR1783600control19.474
SRR1783602moderate drought stress19.447
SRR1811619moderate drought stress19.337

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.279
DRR006520Root Summer glycyrrhizin high producing strain27.984
DRR006521Root Winter glycyrrhizin high producing strain6.523
DRR006522Root Winter glycyrrhizin high producing strain5.983
DRR006523Root Summer glycyrrhizin low producing strain32.544
DRR006524Root Summer glycyrrhizin low producing strain33.697
DRR006525Leaf Summer glycyrrhizin high producing strain20.462
DRR006526Leaf Summer glycyrrhizin high producing strain21.036

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)52.138
SRR2868004Drought Stress(Tissue:root)62.842
SRR2967015Control (Tissue:root)65.332

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.810
SRR9715740Leave57.276
SRR9715741Leave49.518
SRR9715739Root13.291
SRR9715742Root26.278
SRR9715743Root25.079

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.584
SRR8749028MeJA induced 9h15.651
SRR8749029MeJA induced 9h8.603
SRR8749030Uninduced6.967
SRR8749031Uninduced3.259
SRR8749032Uninduced3.822

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.656
SRR8400027Control-Root45.988

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved