Gene detail information of Glyur000105s00014183.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G26170.14.00E-13WRKY DNA-binding protein 50
NRXP_003588914.18.69E-33WRKY transcription factor [Medicago truncatula]
Swissprottr|Q8VWQ5|WRK50_ARATH2.00E-15Probable WRKY transcription factor 50
trEMBLtr|G7I8Z5|G7I8Z5_MEDTR3.00E-33WRKY family transcription factor {ECO:0000313|EMBL:AES59165.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001059703999778-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000105s00014183.1PF03106.10WRKY831241.00E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.563
SRR1783600control1.255
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.581
DRR006520Root Summer glycyrrhizin high producing strain0.296
DRR006521Root Winter glycyrrhizin high producing strain1.080
DRR006522Root Winter glycyrrhizin high producing strain0.822
DRR006523Root Summer glycyrrhizin low producing strain1.262
DRR006524Root Summer glycyrrhizin low producing strain1.137
DRR006525Leaf Summer glycyrrhizin high producing strain5.706
DRR006526Leaf Summer glycyrrhizin high producing strain5.173

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.417
SRR2868004Drought Stress(Tissue:root)1.502
SRR2967015Control (Tissue:root)0.296

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.158
SRR9715740Leave4.912
SRR9715741Leave10.663
SRR9715739Root0.249
SRR9715742Root1.812
SRR9715743Root0.529

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.733
SRR8749028MeJA induced 9h6.015
SRR8749029MeJA induced 9h1.545
SRR8749030Uninduced0.841
SRR8749031Uninduced4.502
SRR8749032Uninduced2.044

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.150
SRR8400027Control-Root0.372

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved