Gene detail information of Glyur000105s00014200.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G21482.12.00E-178cytokinin oxidase 7
NRXP_003544550.10PREDICTED: cytokinin dehydrogenase 7-like [Glycine max]
COGYP_001547531.18.00E-70FAD linked oxidase domain-containing protein [Herpetosiphon aurantiacus DSM 785]
Swissprottr|Q9FUJ1|CKX7_ARATH0Cytokinin dehydrogenase 7
trEMBLtr|I1M956|I1M956_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G11280.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00105258790265515+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00279CKX EC:1.5.99.12 Zeatin biosynthesis map00908


Gene Ontology

biological_process

GO:0009690  cytokinin metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0008762  UDP-N-acetylmuramate dehydrogenase activity

GO:0016491  oxidoreductase activity

GO:0016614  oxidoreductase activity, acting on CH-OH group of donors

GO:0019139  cytokinin dehydrogenase activity

GO:0050660  flavin adenine dinucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000105s00014200.1PF01565.18FAD_binding_4491942.30E-27
Glyur000105s00014200.1PF09265.5Cytokin-bind2265064.10E-103


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.806
SRR1783600control15.889
SRR1783602moderate drought stress20.237
SRR1811619moderate drought stress20.158

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain42.149
DRR006520Root Summer glycyrrhizin high producing strain42.749
DRR006521Root Winter glycyrrhizin high producing strain27.576
DRR006522Root Winter glycyrrhizin high producing strain27.480
DRR006523Root Summer glycyrrhizin low producing strain20.621
DRR006524Root Summer glycyrrhizin low producing strain21.280
DRR006525Leaf Summer glycyrrhizin high producing strain18.145
DRR006526Leaf Summer glycyrrhizin high producing strain17.933

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.825
SRR2868004Drought Stress(Tissue:root)22.725
SRR2967015Control (Tissue:root)31.870

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.317
SRR9715740Leave43.086
SRR9715741Leave40.378
SRR9715739Root23.157
SRR9715742Root45.628
SRR9715743Root37.021

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.652
SRR8749028MeJA induced 9h100.811
SRR8749029MeJA induced 9h75.437
SRR8749030Uninduced30.718
SRR8749031Uninduced70.580
SRR8749032Uninduced44.078

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.512
SRR8400027Control-Root17.425

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved