Gene detail information of Glyur000106s00011712.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G57120.11.00E-109Protein kinase superfamily protein
NRXP_003591872.10Cysteine-rich receptor-like protein kinase [Medicago truncatula]
COGYP_003651948.11.00E-12PASTA sensor domain-containing serine/threonine protein kinase [Thermobispora bispora DSM 43833]
Swissprottr|F4IB81|LYK3_ARATH4.00E-39LysM domain receptor-like kinase 3 (Precursor)
trEMBLtr|G7I510|G7I510_MEDTR0Serine/Threonine kinase family protein {ECO:0000313|EMBL:AES62123.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001067225373542-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000106s00011712.1PF00069.20Pkinase1463963.20E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.129
SRR1783600control9.358
SRR1783602moderate drought stress13.748
SRR1811619moderate drought stress13.481

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.447
DRR006520Root Summer glycyrrhizin high producing strain9.497
DRR006521Root Winter glycyrrhizin high producing strain6.394
DRR006522Root Winter glycyrrhizin high producing strain5.202
DRR006523Root Summer glycyrrhizin low producing strain12.221
DRR006524Root Summer glycyrrhizin low producing strain12.194
DRR006525Leaf Summer glycyrrhizin high producing strain3.830
DRR006526Leaf Summer glycyrrhizin high producing strain3.572

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.844
SRR2868004Drought Stress(Tissue:root)12.453
SRR2967015Control (Tissue:root)12.083

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.086
SRR9715740Leave2.974
SRR9715741Leave6.657
SRR9715739Root18.586
SRR9715742Root13.559
SRR9715743Root14.438

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.718
SRR8749028MeJA induced 9h16.975
SRR8749029MeJA induced 9h12.108
SRR8749030Uninduced11.370
SRR8749031Uninduced9.586
SRR8749032Uninduced12.715

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.056
SRR8400027Control-Root11.088

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved