Gene detail information of Glyur000106s00011732.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G39000.13.00E-107Acyl-CoA N-acyltransferases (NAT) superfamily protein
NRXP_004496275.10PREDICTED: uncharacterized protein LOC101514892 isoform X1 [Cicer arietinum]
COGNP_440447.13.00E-09hypothetical protein slr1906 [Synechocystis sp. PCC 6803]
trEMBLtr|G7I387|G7I387_MEDTR3.00E-180Acyl-CoA N-acyltransferase domain protein {ECO:0000313|EMBL:AES62150.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00106214998219931-


Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0008080  N-acetyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000106s00011732.1PF00583.19Acetyltransf_11832493.10E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.294
SRR1783600control8.189
SRR1783602moderate drought stress8.187
SRR1811619moderate drought stress8.208

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.967
DRR006520Root Summer glycyrrhizin high producing strain10.069
DRR006521Root Winter glycyrrhizin high producing strain4.845
DRR006522Root Winter glycyrrhizin high producing strain4.248
DRR006523Root Summer glycyrrhizin low producing strain11.411
DRR006524Root Summer glycyrrhizin low producing strain11.772
DRR006525Leaf Summer glycyrrhizin high producing strain20.069
DRR006526Leaf Summer glycyrrhizin high producing strain19.779

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.100
SRR2868004Drought Stress(Tissue:root)10.773
SRR2967015Control (Tissue:root)11.153

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.143
SRR9715740Leave22.390
SRR9715741Leave17.957
SRR9715739Root4.948
SRR9715742Root6.705
SRR9715743Root6.003

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.832
SRR8749028MeJA induced 9h4.472
SRR8749029MeJA induced 9h4.431
SRR8749030Uninduced3.736
SRR8749031Uninduced2.215
SRR8749032Uninduced1.534

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.034
SRR8400027Control-Root11.675

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved