Gene detail

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Gene detail information of Glyur000107s00007210.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G05940.1	5.00E-134	Protein kinase superfamily protein
NR	XP_004501421.1	0	PREDICTED: putative receptor-like protein kinase At1g72540-like [Cicer arietinum]
COG	YP_001958461.1	2.00E-20	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9CAH1\|Y1725_ARATH	5.00E-138	Putative receptor-like protein kinase At1g72540
trEMBL	tr\|K7KIB4\|K7KIB4_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G05980.2}

Sequence

Transcript Sequence

>Glyur000107s00007210.1
ATGACTACTAAAAAGATTACATGGAAGTCCATTGTCTTGATCTTAAGTTGTTACAAGAGTACTAAATACACCTTGCAGGAATCAGAAAAACGGGGTTTAAAACAAGGTTCTTTCCAAAGGCTAAGCCTCTCGGATGTAAGCATTTCCAGCTCCACTCAGACCATTGAAGATCTTTCTGTTTCCATTTCCCTTGTTGGCTCAAAGCTTTACACATTCACCCTAGAGGAGCTGAGAGAAGCAACACATAACTTTTCATGGAGTAATATGCTTGGTGAAGGAGGGTTTGGACCCGTGTACAAGGGTTTTGTTGATGACAAACTCAGAACTGGTTTGAAGGCTCAGCCTGTAGCTGTGAAACAACTGAACTTGGATGGCTTGCAAGGTCACAGAGAGTGGCTGGCAGAGATTATATTTCTTGGACAGCTGAGACATCCACATCTTGTGAAGTTAATTGGGTACTGTTGTGAGGAGGAGCACAGGCTTTTGGTGTATGAATACATGGCAAGAGGGAGCTTGGAGAATCAATTGTTCAGAAGATACTCTGCAACCTTACCATGGTCAACCAGGATGAAAATTGCATTAGGTGCAGCTAAGGGTCTGGCCTTCCTTCACGAAGCAGATAAACCTGTAATATACAGGGATTTCAAAACTTCAAATATCTTACTGGACTCGGATTACACAGCTAAACTATCAGACCTTGGGCTGGCTAAGGATGGTCCTGAAGGGGAAGACACACATTTGACAACAACAAGCATAATGGGAACAAAAGGCTATGCTGCTCCTGACTATGGAGTTGTTTTGTTGGAACTGCTTACAGGAAAGCGGGTAGTGGAGAAGAGCCGGTCATCAAATCGAGAGCGAAACCTGGTGGACTGGGCAAGGCCTCTTTTGAGAGACCAAAGAAAGCTTCCCCATATCATAGACTCAAGATTAGAGGGGCAGTTTCCTAGTAAAGGAGCCCTTAAGGTTGCTGCATTGACTTATAAATGCTTGAGCCACAACCCCACTCCAAGGCCCACCATGAGTGAAGTGGTAAAGGTATTGGAGTCACTTCAGGATTTCGATGATATGATCATAGGACCATTTGTGTATGTGGCCGTTACTGAGAGTGACCAATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00107	3751	5751	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.2.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000107s00007210.1	PF07714.12	Pkinase_Tyr	87	348	1.00E-32

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.679
SRR1783600	control	0.739
SRR1783602	moderate drought stress	0.944
SRR1811619	moderate drought stress	0.881

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.959
DRR006520	Root Summer glycyrrhizin high producing strain	0.955
DRR006521	Root Winter glycyrrhizin high producing strain	2.100
DRR006522	Root Winter glycyrrhizin high producing strain	1.555
DRR006523	Root Summer glycyrrhizin low producing strain	0.870
DRR006524	Root Summer glycyrrhizin low producing strain	1.076
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.751
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.546

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	2.472
SRR2868004	Drought Stress(Tissue:root)	2.668
SRR2967015	Control (Tissue:root)	2.518

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.417
SRR9715740	Leave	0.447
SRR9715741	Leave	0.345
SRR9715739	Root	0.725
SRR9715742	Root	0.753
SRR9715743	Root	0.497

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.085
SRR8749028	MeJA induced 9h	2.065
SRR8749029	MeJA induced 9h	1.084
SRR8749030	Uninduced	13.411
SRR8749031	Uninduced	11.954
SRR8749032	Uninduced	11.155

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	4.871
SRR8400027	Control-Root	2.963