Gene detail

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Gene detail information of Glyur000107s00007231.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G38470.1	1.00E-31	ACT-like protein tyrosine kinase family protein
NR	XP_003603193.1	0	Protein kinase C [Medicago truncatula]
COG	NP_623114.1	3.00E-14	Serine/threonine protein kinase [Thermoanaerobacter tengcongensis MB4]
Swissprot	tr\|Q05609\|CTR1_ARATH	8.00E-30	Serine/threonine-protein kinase CTR1
trEMBL	tr\|G7J8D7\|G7J8D7_MEDTR	0	Serine/Threonine kinase family protein {ECO:0000313\|EMBL:AES73444.1}

Sequence

Transcript Sequence

>Glyur000107s00007231.1
GTCAAAGAGAAGAAACTAAATCAAAGTATCAAACAGACATGAACAACATCAGCAACAGTCCTCATCAAACTCGACAGAACCAGCTGTCTCGGCACTCATCCAAGTCGTCGAATTCGAGGGNGAAGCAACAAGAGCCACTTAGCCCTTTTCCCAGTGGATGTTGTCGAGGCTTCAGCAGCGTTAGGACTGTGGCATCCACCACACCAACCGCACAACAGCATCAGCATCAGNTCCAGCAGCGTTATGAGAGATTGGAAGCAAAGGTGGCAGATTTGGAAAAGGAGGTGCAAAAGCAGACAGAACTGCGAGTGACGTACAGGAAAAGAATGGAAAGGACGCAAGACTACTTAAGGTACTGCCTCCAAATCGCAAAGGAGAATGGAATCTTGGACCTCATTGTCCACTCCAAAGGTGAACTCCAACAATCTCCCCTCTCTCTCTACAACCTCAGCTCCATTACCAACAGTCCTCAAATTCCCACTCCCACCCTGCACCAACTTGAGCAGATTCAGTTGGAAGAGAAAATAGGGCAGGGAAGCACCGCAGACATTCACAGGGGAACATGGCGTGGATTTGAAGTGGCAGTGAAATGCATTTCTGCTGAATTCTTCCGCACAAATGCAAACGGTGTTGAATTCTTTGCCCAAGAGGTTGAGACTCTGTCAAAGCAGCGCCACCGGTTCGTGCTTCACCTGATGGGTGCGTGTCTTGAGCCTCCTCGCCACGCATGGGTGGTCACCGAGTACCTGAGCACCACGCTGAAGGTGTGGCTGCATGGTCCGGGCAAAAGGCGCAGAGACAGAGTAGTGCCACTTCCTCCCTTCAAGGACAGAGTGATTCGGGCCTTAGAGATGGCCCAAGCCATGCAGTATCTCCACGAACAAAGGCCCAAAGTCATTCACCGTGACTTGAAGCCCAGTAACATTTTCTTGGATGATGCCATGCATGTTAGGGTTGCTGATTTTGGACATGCCCGCTTCTTAGAGGATGGGGAAATGGCTCTCACCGGAGATACAGGCAAGCTTAGGGAACATACGTGTATATGGCACCAGAGTTTTGGAGTCATACTGAATGAACTTCTAACTGGAAAGTACCCGTACATTGAGACAGAGTATGGTCCTGCCAAGATTGCTATGGAAGTTGTGGAGGGAAAGCTGCGGCCTATGCTTCCGTCACGAGACGATGGTGACCAACTGGGAGAGCTGATTGACCTTATATGCCTTTGCTGGGATGGGAATCCCTCCACTCGACCATCCTTCGCTACAATTAGCCGTGGCCTCAAAAGCTATGCCAAGAGTGTCCTTTCAAGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00107	115843	118409	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:2.1.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000107s00007231.1	PF07714.12	Pkinase_Tyr	157	412	4.80E-29

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.028
SRR1783600	control	0.028
SRR1783602	moderate drought stress	0.029
SRR1811619	moderate drought stress	0.029

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.082
DRR006520	Root Summer glycyrrhizin high producing strain	0.081
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.071
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.070

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.063
SRR2868004	Drought Stress(Tissue:root)	0.001
SRR2967015	Control (Tissue:root)	0.064

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.103
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.040
SRR9715743	Root	0.023

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.110
SRR8749028	MeJA induced 9h	0.063
SRR8749029	MeJA induced 9h	0.153
SRR8749030	Uninduced	0.097
SRR8749031	Uninduced	0.099
SRR8749032	Uninduced	0.320

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.041
SRR8400027	Control-Root	0.053