Gene detail information of Glyur000107s00007235.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G12040.12.00E-122Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
NRXP_004501439.10PREDICTED: omega-amidase NIT2-like isoform X2 [Cicer arietinum]
COGYP_001320997.19.00E-75nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Alkaliphilus metalliredigens QYMF]
Swissprottr|Q8RUF8|NILP3_ARATH2.00E-164Omega-amidase,chloroplastic (Precursor)
trEMBLtr|G7J8D4|G7J8D4_MEDTR1.00E-173Carbon-nitrogen family hydrolase {ECO:0000313|EMBL:AES73441.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00107138278143952-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13566NIT2 EC:3.5.1.3 Alanine, aspartate and glutamate metabolism map00250


Gene Ontology

biological_process

GO:0006807  nitrogen compound metabolic process


molecular_function

GO:0016810  hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.045
SRR1783600control22.537
SRR1783602moderate drought stress19.521
SRR1811619moderate drought stress19.907

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.907
DRR006520Root Summer glycyrrhizin high producing strain35.571
DRR006521Root Winter glycyrrhizin high producing strain9.158
DRR006522Root Winter glycyrrhizin high producing strain9.128
DRR006523Root Summer glycyrrhizin low producing strain34.164
DRR006524Root Summer glycyrrhizin low producing strain34.321
DRR006525Leaf Summer glycyrrhizin high producing strain27.130
DRR006526Leaf Summer glycyrrhizin high producing strain27.963

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.659
SRR2868004Drought Stress(Tissue:root)20.872
SRR2967015Control (Tissue:root)20.386

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.826
SRR9715740Leave28.651
SRR9715741Leave20.076
SRR9715739Root20.577
SRR9715742Root18.980
SRR9715743Root18.994

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.948
SRR8749028MeJA induced 9h21.893
SRR8749029MeJA induced 9h21.331
SRR8749030Uninduced11.006
SRR8749031Uninduced7.457
SRR8749032Uninduced7.124

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.259
SRR8400027Control-Root29.891

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved