Gene detail information of Glyur000107s00007236.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16100.1 | 2.00E-12 | |
| NR | XP_004501440.1 | 1.99E-108 | PREDICTED: hybrid signal transduction histidine kinase A-like [Cicer arietinum] |
| Swissprot | tr|Q9FGD1|RKD3_ARATH | 9.00E-09 | Protein RKD3 |
| trEMBL | tr|G7J8D2|G7J8D2_MEDTR | 2.00E-97 | RWP-RK domain protein {ECO:0000313|EMBL:AES73439.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00107 | 144937 | 146910 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | RWP-RK |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000107s00007236.1 | PF02042.10 | RWP-RK | 241 | 286 | 2.80E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.036 |
| SRR1811619 | moderate drought stress | 0.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.102 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.008 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.104 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.005 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.096 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.029 |
| SRR8400027 | Control-Root | 0.000 |