Gene detail information of Glyur000107s00007253.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33110.22.00E-155S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NRXP_004501447.10PREDICTED: (S)-coclaurine N-methyltransferase-like isoform X2 [Cicer arietinum]
COGYP_001964606.17.00E-118cyclopropane-fatty-acyl-phospholipid synthase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Swissprottr|Q5C9L6|CNMT_THLFG6.00E-128(S)-coclaurine N-methyltransferase
trEMBLtr|A0A067KCV9|A0A067KCV9_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP34061.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00107181801185106+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13384E2.1.1.140 EC:2.1.1.140 Isoquinoline alkaloid biosynthesis map00950


Gene Ontology

biological_process

GO:0008610  lipid biosynthetic process



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000107s00007253.1PF02353.15CMAS1013497.20E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.784
SRR1783600control2.699
SRR1783602moderate drought stress2.200
SRR1811619moderate drought stress2.160

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.066
DRR006520Root Summer glycyrrhizin high producing strain1.944
DRR006521Root Winter glycyrrhizin high producing strain2.235
DRR006522Root Winter glycyrrhizin high producing strain2.527
DRR006523Root Summer glycyrrhizin low producing strain0.875
DRR006524Root Summer glycyrrhizin low producing strain0.907
DRR006525Leaf Summer glycyrrhizin high producing strain60.063
DRR006526Leaf Summer glycyrrhizin high producing strain59.876

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.112
SRR2868004Drought Stress(Tissue:root)28.453
SRR2967015Control (Tissue:root)18.141

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave65.355
SRR9715740Leave80.795
SRR9715741Leave66.746
SRR9715739Root0.783
SRR9715742Root6.257
SRR9715743Root4.050

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.036
SRR8749028MeJA induced 9h8.075
SRR8749029MeJA induced 9h10.035
SRR8749030Uninduced7.408
SRR8749031Uninduced16.205
SRR8749032Uninduced14.452

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.853
SRR8400027Control-Root20.710

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved