Gene detail information of Glyur000107s00007258.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G72770.37.00E-108homology to ABI1
NRXP_004501450.11.73E-169PREDICTED: protein phosphatase 2C 16-like isoform X1 [Cicer arietinum]
COGYP_003709340.18.00E-13serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
Swissprottr|Q9CAJ0|P2C16_ARATH9.00E-132Protein phosphatase 2C 16 (Precursor)
trEMBLtr|G7J8B9|G7J8B9_MEDTR5.00E-165Protein phosphatase 2C family protein {ECO:0000313|EMBL:AES73426.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00107208816212544-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14497PP2C EC:3.1.3.16 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Insulin resistancemap04931


Gene Ontology

molecular_function

GO:0003824  catalytic activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000107s00007258.2PF00481.16PP2C72431.90E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.440
SRR1783600control19.749
SRR1783602moderate drought stress24.879
SRR1811619moderate drought stress24.542

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.821
DRR006520Root Summer glycyrrhizin high producing strain21.591
DRR006521Root Winter glycyrrhizin high producing strain23.196
DRR006522Root Winter glycyrrhizin high producing strain20.329
DRR006523Root Summer glycyrrhizin low producing strain20.898
DRR006524Root Summer glycyrrhizin low producing strain21.719
DRR006525Leaf Summer glycyrrhizin high producing strain21.394
DRR006526Leaf Summer glycyrrhizin high producing strain20.556

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.407
SRR2868004Drought Stress(Tissue:root)43.651
SRR2967015Control (Tissue:root)41.854

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.958
SRR9715740Leave32.845
SRR9715741Leave27.726
SRR9715739Root5.231
SRR9715742Root16.315
SRR9715743Root15.111

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.430
SRR8749028MeJA induced 9h18.672
SRR8749029MeJA induced 9h14.173
SRR8749030Uninduced13.144
SRR8749031Uninduced7.892
SRR8749032Uninduced7.745

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root40.295
SRR8400027Control-Root39.953

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved