Gene detail information of Glyur000107s00007260.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33080.20AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
NRXP_004501452.10PREDICTED: serine/threonine-protein kinase CBK1-like [Cicer arietinum]
COGYP_006921214.19.00E-23serine/threonine-protein kinase Sps [Thermacetogenium phaeum DSM 12270]
Swissprottr|Q9LE81|IRE_ARATH6.00E-75Probable serine/threonine protein kinase IRE {ECO:0000305}
trEMBLtr|V7AW65|V7AW65_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW08853.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00107219555226681-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000107s00007260.1PF00069.20Pkinase802311.60E-42
Glyur000107s00007260.1PF00069.20Pkinase2963971.20E-18
Glyur000107s00007260.1PF00433.19Pkinase_C4154644.30E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control35.465
SRR1783600control35.337
SRR1783602moderate drought stress40.165
SRR1811619moderate drought stress39.821

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain66.178
DRR006520Root Summer glycyrrhizin high producing strain65.454
DRR006521Root Winter glycyrrhizin high producing strain29.421
DRR006522Root Winter glycyrrhizin high producing strain28.311
DRR006523Root Summer glycyrrhizin low producing strain74.243
DRR006524Root Summer glycyrrhizin low producing strain72.258
DRR006525Leaf Summer glycyrrhizin high producing strain28.696
DRR006526Leaf Summer glycyrrhizin high producing strain28.704

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)77.789
SRR2868004Drought Stress(Tissue:root)70.024
SRR2967015Control (Tissue:root)84.587

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.569
SRR9715740Leave34.397
SRR9715741Leave33.645
SRR9715739Root6.536
SRR9715742Root21.410
SRR9715743Root20.318

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h27.033
SRR8749028MeJA induced 9h28.191
SRR8749029MeJA induced 9h12.088
SRR8749030Uninduced8.440
SRR8749031Uninduced3.048
SRR8749032Uninduced2.588

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root89.703
SRR8400027Control-Root76.265

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved