Gene detail

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Gene detail information of Glyur000107s00007263.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G12000.1	0	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
NR	XP_004501455.1	0	PREDICTED: U-box domain-containing protein 35-like isoform X2 [Cicer arietinum]
COG	NP_623114.1	2.00E-26	Serine/threonine protein kinase [Thermoanaerobacter tengcongensis MB4]
Swissprot	tr\|Q9FKG6\|PUB52_ARATH	6.00E-126	Serine/threonine-protein kinase
trEMBL	tr\|I1JTY6\|I1JTY6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G05600.1}

Sequence

Transcript Sequence

>Glyur000107s00007263.1
ATGGCTATGTGTGTCTTACCGCAGCCATGTGGCACGCAACCGCAAAACATCACAATGGTGGCTGTTGACAAAGACAAGAANAGCGCTTATGCCTTCCGATGGGCTATTAACCATCTCGACAACCCTGTCATCATTGCTGTCCATGTCAAGCACAAAAACTTACATAACCAGGGCATGAATGTTTTTCCACCGGACGAAGAGGATTCAACACATATCTTCAATAACTTACGAGGAATGTGTCAACGNAAAGCTGTCACGATGAAAGAAGCCGTAATCGATGATAATGATGTTGTTAGAGGACTTTTGGAATTCGCAAACAGGAATGTGATACACAGTATCGTCATCGGTGCATCCACCAAGAACCATTTGACAAGTCTAAAAAAATTCAAAGCCTATCATGACATACCAACAGCCATGATCAGATCAGCCCCAGATTATTGTTCTGTATACGTAATTTCCAAATTGAAGATTGTGTCAGCTCGATCAGCAATACGGTCAATGGCAAACCAGTATCTCCCACCAAACAAACAATCTGTTCATGACTCATACCCACTTATTGAATCAGAAAATGGATCAGTAAGCAACAGAGGATATCCACCTAGAAGTGGGGGCAGTAACGAAGGATCAGAATCAAGGTCTTTTGATAGCATTTATCCATTGAAAGCACAGGCACGTGAAAGGCCAAGGAGTGCGGGAAGTAATCTATCAATGGACCACTTTGATATACCTAGTCGTGCACGACATTGGGCATCAATGGATGAAAAAGACATTTTGGGACCTGGGCCAATTGATGTAACCAGACTTGATTTGGATTTCACTGTTTCTTCAGATACACCGTCGGCATCCCAGACTTCAAAAGACCTTGAAGCTGAGATGAAAAGATTAAGGCTTGAACTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAGCAAGCAATCTCGGCCAAAAATCAGGCAGAACAGATTCGTCGATGGAAACTACAAGAGGAACGCAAGGTTGAGGAAGTTAGGTTGTCTCAAGAGGCAGCACTTGCATTGGCAGAGAAGGAGAAGGCTAGAGCCAAAGCTGCACTGGAAGCAGCTGAGGAAGCCAGGAAGAAGGCTGAACAGGAAGCACAGAGAAGAAAGGAGGTAGAGATGAAGGCTAGGAAAGAGGCAGAAGAGAGGAACCGAGTATTAACCGCGTATGCTCAAAATGATGCACGATATAGAAGATACACCATGCAAGAGATTGAAGTGGCCACTGAAAAGTTCTCCCCATTAAAGAAAATAGGTGAAGGTGGATACGGACCTGTGTACAAGGGCCGACTTGATCACACCTCAGTTGCAATCAAAATTTTAAGTCCTGAAGCTTCTCAGGGCAGGAAACAATTCCAACAAGAGGTTGAGGTACTAAGCTGCATTAGACACCCAAATATGGTCCTCCTCCTCGGTGCCTGTCCAGAGCAAGGTTGTTTGGTGTATGAATACATGGATAATGGTAGCTTAGAAGATAGATTATTTCGAAAAAATAACAGTCGTCCTCTTTCGTGGAGGAAACGGTTCCAAATAGCTTCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAACAAGGCCAGAGCCCATTGTGCACCGAGACCTTAAACCATCCAACATTTTGTTGGACAGAAATTACGTGAGCAAGATCAGTGATGTTGGTCTAGCTAGATTAGTTCCATCTTCTGTGGTTGATAATGTCACACAATATTACATGACTTCAGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTACCAACAAACAGGAGTATTAACAACAAAATCAGATATATATTCATTGGGGATAATGCTGTTGCAGATGATCACTGCCAAGCCACCCATGGGTCTTGCTCACCAAGTCAGGAGGGCAATTGAAAAAGACAGGTTTCAAGAGATTCTTGACCCTGTGGTGACTGATTGGCCAGTTGACGAGGCTTTAACATTTGCCAAACTGGCCTTGAGCTGTGCAGAGCTCAGCAAGAAAGACAGGCCAGATCTTTCAACAGTTGTATTGCCTCATCTTAATCGGTTAAGAGACCTTGGATTTGGATGTGATTCACATGATAATCAATTTATTAGCAGTGATGGTAAGAGCAATATCTGTGTGTCACGCCCTCCCACACCTACCTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00107	242489	245914	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.14.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0006950 response to stress

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000107s00007263.1	PF00582.21	Usp	19	126	2.30E-07
Glyur000107s00007263.1	PF00069.20	Pkinase	422	676	3.30E-45

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.051
SRR1783600	control	0.051
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.043
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.043

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.533
SRR2868004	Drought Stress(Tissue:root)	1.033
SRR2967015	Control (Tissue:root)	1.129

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.057
SRR9715743	Root	0.057

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.547
SRR8749028	MeJA induced 9h	1.058
SRR8749029	MeJA induced 9h	1.984
SRR8749030	Uninduced	0.302
SRR8749031	Uninduced	2.380
SRR8749032	Uninduced	1.348

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.620
SRR8400027	Control-Root	0.638