Gene detail information of Glyur000108s00010413.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G38900.32.00E-64Basic-leucine zipper (bZIP) transcription factor family protein
NRXP_003545045.10PREDICTED: transcription factor RF2a-like [Glycine max]
Swissprottr|Q9MA75|VIP1_ARATH9.00E-41Transcription factor VIP1
trEMBLtr|I1MC59|I1MC59_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G40580.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001087961083550-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000108s00010413.1PF00170.16bZIP_13874451.50E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control48.096
SRR1783600control47.838
SRR1783602moderate drought stress39.909
SRR1811619moderate drought stress39.301

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain55.342
DRR006520Root Summer glycyrrhizin high producing strain54.337
DRR006521Root Winter glycyrrhizin high producing strain25.816
DRR006522Root Winter glycyrrhizin high producing strain24.952
DRR006523Root Summer glycyrrhizin low producing strain72.673
DRR006524Root Summer glycyrrhizin low producing strain71.887
DRR006525Leaf Summer glycyrrhizin high producing strain24.859
DRR006526Leaf Summer glycyrrhizin high producing strain24.539

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.896
SRR2868004Drought Stress(Tissue:root)45.120
SRR2967015Control (Tissue:root)43.370

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.754
SRR9715740Leave45.552
SRR9715741Leave35.953
SRR9715739Root23.283
SRR9715742Root58.943
SRR9715743Root50.938

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h200.425
SRR8749028MeJA induced 9h164.483
SRR8749029MeJA induced 9h196.856
SRR8749030Uninduced77.185
SRR8749031Uninduced116.642
SRR8749032Uninduced83.955

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.740
SRR8400027Control-Root40.883

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved